BLASTX nr result

ID: Coptis24_contig00022731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022731
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156881.1| PREDICTED: lys-63-specific deubiquitinase BR...   175   4e-42
ref|XP_004152213.1| PREDICTED: uncharacterized protein LOC101217...   175   4e-42
ref|XP_003543672.1| PREDICTED: uncharacterized protein LOC100781...   174   5e-42
ref|XP_002285369.1| PREDICTED: uncharacterized protein LOC100253...   174   5e-42
gb|AFK46473.1| unknown [Medicago truncatula]                          171   4e-41

>ref|XP_004156881.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Cucumis
           sativus]
          Length = 109

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/98 (85%), Positives = 91/98 (92%)
 Frame = -3

Query: 295 MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 116
           MSLT VKMSE+VWFTC+THALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 115 KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSH 2
           KDRVET+PEQLAAA+AQAERMT  TG+ TRVIGWYHSH
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSH 98


>ref|XP_004152213.1| PREDICTED: uncharacterized protein LOC101217628 [Cucumis sativus]
          Length = 436

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/98 (85%), Positives = 91/98 (92%)
 Frame = -3

Query: 295 MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 116
           MSLT VKMSE+VWFTC+THALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 115 KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSH 2
           KDRVET+PEQLAAA+AQAERMT  TG+ TRVIGWYHSH
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSH 98


>ref|XP_003543672.1| PREDICTED: uncharacterized protein LOC100781761 [Glycine max]
          Length = 436

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/98 (85%), Positives = 91/98 (92%)
 Frame = -3

Query: 295 MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 116
           MSLT+VKMSEEVW +CVTHALSTETEEIMGLLLGDIQ S NG+ TALIWGASPQTRSDRR
Sbjct: 1   MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 115 KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSH 2
           KDRVETNPEQLAAA+A A+RMT +TG+ TRVIGWYHSH
Sbjct: 61  KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSH 98


>ref|XP_002285369.1| PREDICTED: uncharacterized protein LOC100253140 [Vitis vinifera]
          Length = 437

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/98 (86%), Positives = 89/98 (90%)
 Frame = -3

Query: 295 MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 116
           MSLT VKMSE+VW TC THALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1   MSLTCVKMSEDVWLTCTTHALSTETEEIMGLLLGDIEYSKNGSVTALIWGASPQTRSDRR 60

Query: 115 KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSH 2
           KDRVETNPEQLAAA+AQAERMT  TGK TRVIGWYHSH
Sbjct: 61  KDRVETNPEQLAAASAQAERMTVATGKTTRVIGWYHSH 98


>gb|AFK46473.1| unknown [Medicago truncatula]
          Length = 193

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/98 (83%), Positives = 88/98 (89%)
 Frame = -3

Query: 295 MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 116
           MSLT+VKMSEEVW TC THA STETEEIMGLLLGDIQ S NG+ TALIWGASPQTRSDRR
Sbjct: 1   MSLTSVKMSEEVWLTCATHAFSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 115 KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSH 2
           KDRVETNPEQLAAA+A  ++MT TTG+ TRVIGWYHSH
Sbjct: 61  KDRVETNPEQLAAASALTDKMTVTTGRTTRVIGWYHSH 98


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