BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022727
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    60   1e-07
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    57   1e-06
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    56   3e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
 Frame = +3

Query: 6   ILGACNAFLCISEINVMNISFLPRNPIYVFNPITKETAELPNFTVPKRDVPDSVDEGKKT 185
           ++G+CN  LC+++        L ++ +YV NP T++  +LP         PD        
Sbjct: 124 VVGSCNGLLCLADS-------LFKDAVYVHNPFTRDFKQLPK----SLQYPDQ------- 165

Query: 186 DKCLSGFGYYD--SVFKLVLVIFTARNY-------HAQIFNNEVQILTLGSSSWRRKKSI 338
            + + GFGY+    V+K+V V++    Y             +EVQ+LTLGS +W R    
Sbjct: 166 -EVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTW-RSLGK 223

Query: 339 VPMRLRRAYKTVSAPIVNGCLHWIT 413
           V  +L R     S  +VNG LHW+T
Sbjct: 224 VSYQLDR---WPSEALVNGRLHWVT 245


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
 Frame = +3

Query: 6   ILGACNAFLCISEINVMNISFLPRNPIYVFNPITKETAELPNFTVPKRDVPDSVDEGKKT 185
           ++G+CN  LC+S+        L  + +Y++NP T    ELP         PD        
Sbjct: 124 VVGSCNGLLCLSDS-------LYNDSLYIYNPFTGCYKELPK----SLQYPDQ------- 165

Query: 186 DKCLSGFGYYDSV--FKLVLVIFTARNYHAQIFNN--------EVQILTLGSSSWRRKKS 335
            + +SGFG+      +K++ +++  RN H     +        EVQILTLG   WR    
Sbjct: 166 -EVVSGFGFNPKTKEYKVIRIVYY-RNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGK 223

Query: 336 IVPMRLRRAYKTVSAPIVNGCLHWIT 413
           +    +RRA    S  +VNG LHWI+
Sbjct: 224 VSYRLVRRA----SGALVNGRLHWIS 245


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/138 (29%), Positives = 70/138 (50%)
 Frame = +3

Query: 3   TILGACNAFLCISEINVMNISFLPRNPIYVFNPITKETAELPNFTVPKRDVPDSVDEGKK 182
           T+LG+CN  LCIS +          + I  +NP  ++   LP   VP+R  PD+     +
Sbjct: 92  TLLGSCNGLLCISNV---------ADDIAFWNPSLRQHRILPYLPVPRRRHPDTTLFAAR 142

Query: 183 TDKCLSGFGYYDSVFKLVLVIFTARNYHAQIFNNEVQILTLGSSSWRRKKSIVPMRLRRA 362
              C  GF +    +KLV + +   + H + F+++V++ TL +++W+   S+ P  L  A
Sbjct: 143 V--CGFGFDHKTRDYKLVRISYFV-DLHDRSFDSQVKLYTLRANAWKTLPSL-PYALCCA 198

Query: 363 YKTVSAPIVNGCLHWITT 416
            +T+    V   LHW+ T
Sbjct: 199 -RTMGV-FVGNSLHWVVT 214


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
 Frame = +3

Query: 6   ILGACNAFLCISEINVMNISFLPRNPIYVFNPITKETAELPNFTVPKRDVPDSVDEGKKT 185
           ++G+CN  LC+S+        L  + +Y++NP T    ELP         PD        
Sbjct: 123 VVGSCNGLLCLSDS-------LFNDSLYIYNPFTGRYKELPK----SLQYPDQ------- 164

Query: 186 DKCLSGFGYYDSV--FKLVLVIFTARNYHAQIFNN--------EVQILTLGSSSWRRKKS 335
            + + GFG+      +K++ +++  RN H +   +        +VQILTLG   WR    
Sbjct: 165 -EVVFGFGFNPKTNEYKVIRIVYY-RNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGK 222

Query: 336 IVPMRLRRAYKTVSAPIVNGCLHWIT 413
           +    +RRA +T    +VNG LHW++
Sbjct: 223 VSYRLVRRASET----LVNGRLHWVS 244