BLASTX nr result

ID: Coptis24_contig00022719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022719
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282350.2| PREDICTED: uncharacterized protein LOC100267...   400   e-109
ref|XP_003544449.1| PREDICTED: uncharacterized protein LOC100820...   392   e-107
ref|XP_003550348.1| PREDICTED: uncharacterized protein LOC100819...   391   e-106
emb|CBI19565.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002326920.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102

>ref|XP_002282350.2| PREDICTED: uncharacterized protein LOC100267859 [Vitis vinifera]
          Length = 1068

 Score =  400 bits (1029), Expect = e-109
 Identities = 188/222 (84%), Positives = 207/222 (93%), Gaps = 1/222 (0%)
 Frame = -2

Query: 666 GSNKQSVGLLDNLKMESFRTILTDKYQYPHEHSRHAIIAVVAGCLFFISSDNLHTLIQKL 487
           GS+KQSVGLL+ LKME  RTILT +Y YPHEHSRHAIIAVV GCLFFISSDN+HTLIQKL
Sbjct: 51  GSDKQSVGLLETLKMERVRTILTHRYPYPHEHSRHAIIAVVVGCLFFISSDNMHTLIQKL 110

Query: 486 DNNVKWWSMYGCLLGFFYFFSSPFIGKTIKPSYSNFSRWYIAWILVAALYHLPSFQSMGL 307
           DNN+KWWSMY CLLGFFYFFSSPFIGKTIKPSYSNFSRWY+AWILVAA+YHLPSF SMG+
Sbjct: 111 DNNIKWWSMYACLLGFFYFFSSPFIGKTIKPSYSNFSRWYVAWILVAAIYHLPSFLSMGV 170

Query: 306 DMRMNLSLFLTIYTSSIIFLLVFHIVFYALWYIGVVARVAGKKPELLTIMQNCAVLSIAC 127
           DMRMNLSLFLTIY SSI+FLLVFHI+F  LWYIG+VARVAGKKPE+LTI+QNCAVLSIAC
Sbjct: 171 DMRMNLSLFLTIYVSSILFLLVFHIMFLGLWYIGLVARVAGKKPEILTIIQNCAVLSIAC 230

Query: 126 CVFYSHCGNRAIVRERPFERKNS-WFSSSFWKREERNIWLAR 4
           CVFYSHCGNRAI+R+RPFER+NS WF  SFWK+EERN WL++
Sbjct: 231 CVFYSHCGNRAILRQRPFERRNSGWF--SFWKKEERNTWLSK 270


>ref|XP_003544449.1| PREDICTED: uncharacterized protein LOC100820584 [Glycine max]
          Length = 1021

 Score =  392 bits (1008), Expect = e-107
 Identities = 181/223 (81%), Positives = 203/223 (91%), Gaps = 1/223 (0%)
 Frame = -2

Query: 669 MGSNKQSVGLLDNLKMESFRTILTDKYQYPHEHSRHAIIAVVAGCLFFISSDNLHTLIQK 490
           MGS+KQS G+LD LKM+  RTILT  Y YPHEHSRHA+IAVV GCLFFISSDN+HTL++K
Sbjct: 1   MGSSKQSAGILDTLKMQRVRTILTHTYPYPHEHSRHAVIAVVVGCLFFISSDNIHTLVEK 60

Query: 489 LDNNVKWWSMYGCLLGFFYFFSSPFIGKTIKPSYSNFSRWYIAWILVAALYHLPSFQSMG 310
           LDNNVKWWSMY CL GFFYFFSSPFIGKT KPSYSNFSRWYIAWILVAA+YHLPSFQSMG
Sbjct: 61  LDNNVKWWSMYACLFGFFYFFSSPFIGKTFKPSYSNFSRWYIAWILVAAVYHLPSFQSMG 120

Query: 309 LDMRMNLSLFLTIYTSSIIFLLVFHIVFYALWYIGVVARVAGKKPELLTIMQNCAVLSIA 130
           +DMRMNLSLFLTIY SSI+FLLVFHI+F  LWYIG V+RVAGK+PE+LTI+QNCAVLS+A
Sbjct: 121 VDMRMNLSLFLTIYLSSILFLLVFHIIFLGLWYIGFVSRVAGKRPEILTILQNCAVLSVA 180

Query: 129 CCVFYSHCGNRAIVRERPFERKNS-WFSSSFWKREERNIWLAR 4
           CCVFYSHCGNRA++RERP +R+NS WF  SFWK+EERN WLA+
Sbjct: 181 CCVFYSHCGNRAMLRERPLDRRNSNWF--SFWKKEERNTWLAK 221


>ref|XP_003550348.1| PREDICTED: uncharacterized protein LOC100819940 [Glycine max]
          Length = 1021

 Score =  391 bits (1005), Expect = e-106
 Identities = 181/223 (81%), Positives = 202/223 (90%), Gaps = 1/223 (0%)
 Frame = -2

Query: 669 MGSNKQSVGLLDNLKMESFRTILTDKYQYPHEHSRHAIIAVVAGCLFFISSDNLHTLIQK 490
           MGS+KQS G+LD LKME  RTILT  Y YPHEHSRHA+IAVV GCLFFISSDN+HTL++K
Sbjct: 1   MGSSKQSAGILDTLKMERVRTILTHTYPYPHEHSRHAVIAVVVGCLFFISSDNIHTLVEK 60

Query: 489 LDNNVKWWSMYGCLLGFFYFFSSPFIGKTIKPSYSNFSRWYIAWILVAALYHLPSFQSMG 310
           LD NVKWWSMY CL GFFYFFSSPFIGKT KPSYSNFSRWYIAWILVAA+YHLPSFQSMG
Sbjct: 61  LDKNVKWWSMYACLFGFFYFFSSPFIGKTFKPSYSNFSRWYIAWILVAAVYHLPSFQSMG 120

Query: 309 LDMRMNLSLFLTIYTSSIIFLLVFHIVFYALWYIGVVARVAGKKPELLTIMQNCAVLSIA 130
           +DMRMNLSLFLTIY SSI+FLLVFHI+F  LWYIG V+RVAGK+PE+LTI+QNCAVLS+A
Sbjct: 121 VDMRMNLSLFLTIYLSSILFLLVFHIIFLGLWYIGFVSRVAGKRPEILTILQNCAVLSVA 180

Query: 129 CCVFYSHCGNRAIVRERPFERKNS-WFSSSFWKREERNIWLAR 4
           CCVFYSHCGNRA++RERP +R+NS WF  SFWK+EERN WLA+
Sbjct: 181 CCVFYSHCGNRAMLRERPLDRRNSNWF--SFWKKEERNTWLAK 221


>emb|CBI19565.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score =  380 bits (975), Expect = e-103
 Identities = 177/208 (85%), Positives = 194/208 (93%), Gaps = 1/208 (0%)
 Frame = -2

Query: 624 MESFRTILTDKYQYPHEHSRHAIIAVVAGCLFFISSDNLHTLIQKLDNNVKWWSMYGCLL 445
           ME  RTILT +Y YPHEHSRHAIIAVV GCLFFISSDN+HTLIQKLDNN+KWWSMY CLL
Sbjct: 1   MERVRTILTHRYPYPHEHSRHAIIAVVVGCLFFISSDNMHTLIQKLDNNIKWWSMYACLL 60

Query: 444 GFFYFFSSPFIGKTIKPSYSNFSRWYIAWILVAALYHLPSFQSMGLDMRMNLSLFLTIYT 265
           GFFYFFSSPFIGKTIKPSYSNFSRWY+AWILVAA+YHLPSF SMG+DMRMNLSLFLTIY 
Sbjct: 61  GFFYFFSSPFIGKTIKPSYSNFSRWYVAWILVAAIYHLPSFLSMGVDMRMNLSLFLTIYV 120

Query: 264 SSIIFLLVFHIVFYALWYIGVVARVAGKKPELLTIMQNCAVLSIACCVFYSHCGNRAIVR 85
           SSI+FLLVFHI+F  LWYIG+VARVAGKKPE+LTI+QNCAVLSIACCVFYSHCGNRAI+R
Sbjct: 121 SSILFLLVFHIMFLGLWYIGLVARVAGKKPEILTIIQNCAVLSIACCVFYSHCGNRAILR 180

Query: 84  ERPFERKNS-WFSSSFWKREERNIWLAR 4
           +RPFER+NS WF  SFWK+EERN WL++
Sbjct: 181 QRPFERRNSGWF--SFWKKEERNTWLSK 206


>ref|XP_002326920.1| predicted protein [Populus trichocarpa] gi|222835235|gb|EEE73670.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  375 bits (962), Expect = e-102
 Identities = 175/223 (78%), Positives = 200/223 (89%), Gaps = 1/223 (0%)
 Frame = -2

Query: 669 MGSNKQSVGLLDNLKMESFRTILTDKYQYPHEHSRHAIIAVVAGCLFFISSDNLHTLIQK 490
           MGS+KQ+ GLL+ L+ME  RTILT  Y YPHEHSRHAIIAVV GCLFFISSDN+HTLI+K
Sbjct: 1   MGSDKQTTGLLETLRMERVRTILTHTYPYPHEHSRHAIIAVVVGCLFFISSDNMHTLIEK 60

Query: 489 LDNNVKWWSMYGCLLGFFYFFSSPFIGKTIKPSYSNFSRWYIAWILVAALYHLPSFQSMG 310
           LDNN+KWWSMY CLLGFFYFFSSPF+GKTIKPSYSNFSRWYIAWILVA LYHLPSFQSMG
Sbjct: 61  LDNNIKWWSMYACLLGFFYFFSSPFLGKTIKPSYSNFSRWYIAWILVATLYHLPSFQSMG 120

Query: 309 LDMRMNLSLFLTIYTSSIIFLLVFHIVFYALWYIGVVARVAGKKPELLTIMQNCAVLSIA 130
           +DMRMNLSLFLTI  SSI+FLLVFHI+F  LWYIG+V+RVAG++P +LTI+QNCAVLS+A
Sbjct: 121 VDMRMNLSLFLTISVSSILFLLVFHIIFIGLWYIGLVSRVAGRRPAILTILQNCAVLSVA 180

Query: 129 CCVFYSHCGNRAIVRERPFERK-NSWFSSSFWKREERNIWLAR 4
           CCVFYSHCGN A +R+R  +RK +SWF  SFWK+EER+ WLA+
Sbjct: 181 CCVFYSHCGNLANLRDRRSQRKYSSWF--SFWKKEERSTWLAK 221


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