BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022710
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativ...   377   e-102
ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...   367   4e-99
ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...   367   4e-99
ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g...   367   4e-99

>ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
            gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2
            protein-like [Cucumis sativus]
          Length = 890

 Score =  377 bits (968), Expect = e-102
 Identities = 196/364 (53%), Positives = 270/364 (74%), Gaps = 9/364 (2%)
 Frame = +1

Query: 55   IKPPFKI--THTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMG 228
            ++P F +  TH    F IA+S + K           ETL++LEW +IC ++S FTSTSMG
Sbjct: 21   LRPVFSLSTTHELMPFRIATSQTLKN----------ETLRVLEWSSICKQLSKFTSTSMG 70

Query: 229  ----RTQNVKIGQSFEESQKLLNQTTAA---LLLPKKLDFEGVEDIKEIVRSAGLGELMS 387
                +  +V+ G++ EESQKLL+QTTAA   +   ++LDF G+ED+  I+ SA  G+L++
Sbjct: 71   FDVAQKADVRFGRTREESQKLLDQTTAAEAVVSTSRRLDFSGIEDVSGILNSAISGKLLT 130

Query: 388  VRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDC 567
            + ELC V+RTL A+R +FE+L+++A    YS+R   L+EILQNC+FL ELE KI FCIDC
Sbjct: 131  IAELCSVRRTLKAARELFEELQALAVGNHYSDRFLPLIEILQNCDFLVELERKIEFCIDC 190

Query: 568  NLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGI 747
            N S+ILDRASEDL+ IR E+K+NM  L+SL KE+S KI+QAGGID PLIT RRSRMC+ +
Sbjct: 191  NYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMCVAV 250

Query: 748  RASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIA 927
            RA+H++L+SDG++L+ SSSGATYFMEP++AV+LNNMEVRLSNSEK+EE+++L  L+ EI+
Sbjct: 251  RATHKNLVSDGILLSTSSSGATYFMEPKNAVDLNNMEVRLSNSEKAEEISILSMLSTEIS 310

Query: 928  ESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRSSNSKISLSVDIEGM 1107
            ESE+ I  LL++I E+DL  ARAAY RW+ GVCP       E + SS +  +LSVDI+ +
Sbjct: 311  ESENHIRCLLDKILELDLALARAAYGRWMSGVCPCFSAKGYEGLNSSITDNTLSVDIDAI 370

Query: 1108 RHPV 1119
            ++P+
Sbjct: 371  QNPL 374


>ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  374 bits (961), Expect = e-101
 Identities = 212/379 (55%), Positives = 269/379 (70%), Gaps = 15/379 (3%)
 Frame = +1

Query: 28   MDSTNFFISIKPPFKITHTFFKFSIASSNSSKTK---------TRVSSKIQKETLKILEW 180
            M+ +N FISIK   K    FF      S  + TK         T  +  +Q ETLKILEW
Sbjct: 1    MELSNHFISIK---KSPILFFTTKPPFSTKALTKPFDSHSPKLTSPAHSLQLETLKILEW 57

Query: 181  DTICSKVSSFTSTSMGR--TQNVKI--GQSFEESQKLLNQTTAALLLPKK--LDFEGVED 342
             ++C++++ FTSTSMG+  T+N KI  G+S EESQKLL+QT AAL + +   LDF G+ED
Sbjct: 58   SSLCNQLTPFTSTSMGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGIED 117

Query: 343  IKEIVRSAGLGELMSVRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCN 522
            I  I+ SA  G L++V ELC V+RTL A+R V E+L+   + G  S R++ LLEILQNC+
Sbjct: 118  ITRILDSAVSGTLLTVGELCAVRRTLRAARAVLERLK---DSGDCSERYAPLLEILQNCS 174

Query: 523  FLTELEHKIGFCIDCNLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGID 702
            F  ELE K+GFCIDCNLS ILDRASEDL+ IRSERK+NM NL+ L K IS +IFQAGGID
Sbjct: 175  FQIELEKKVGFCIDCNLSKILDRASEDLEIIRSERKRNMENLDRLLKGISARIFQAGGID 234

Query: 703  TPLITIRRSRMCIGIRASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEK 882
             PL+T RRSR+C+G+RASHR L+ DGV+LN SSSG TYFMEP +AVELNN+EV LS+SEK
Sbjct: 235  KPLVTKRRSRLCVGVRASHRYLIPDGVVLNVSSSGVTYFMEPGEAVELNNLEVMLSDSEK 294

Query: 883  SEELAVLKKLTFEIAESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVR 1062
            +EE+A+L  LT EIAES  +I Y+L+ I E+DL  ARAAYA W++GV P+        + 
Sbjct: 295  AEEIAILSLLTSEIAESARDIKYMLDGIIEVDLSFARAAYAYWMNGVRPIWTSEGCGGIS 354

Query: 1063 SSNSKISLSVDIEGMRHPV 1119
            SS     LS+DIEG+RHP+
Sbjct: 355  SSGGDYLLSIDIEGIRHPL 373


>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  367 bits (941), Expect = 4e-99
 Identities = 197/367 (53%), Positives = 261/367 (71%), Gaps = 13/367 (3%)
 Frame = +1

Query: 58   KPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMGRTQ 237
            KPP  +   FFK    S+ +S      S+ +Q ETLK LEW ++C ++S+FTSTSMG   
Sbjct: 13   KPPRPL---FFKPRFCSNPNSPE----SNSLQAETLKTLEWGSVCKQLSAFTSTSMGSAA 65

Query: 238  ----NVKIGQSFEESQKLLNQTTAALLLPKKLDFEGVEDIKEIVRSAGLGELMSVRELCE 405
                 + IG++  +SQ+LL+QT+AA L+ + LDF GV D+ EI+  A  G L+++RELC 
Sbjct: 66   ALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVHDLTEILGVATSGHLLTIRELCT 125

Query: 406  VKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDCNLSVIL 585
            V+ TL A+R +F+ L+ VA+   +  R+  LL+ILQNCNF   LE KI FCIDC LS+IL
Sbjct: 126  VRHTLAAARELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIIL 185

Query: 586  DRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGIRASHRS 765
            DRASEDL+ IRSERK+N+  L+SL KE+S++IFQAGGID PLI  RRSRMC+GIRASHR 
Sbjct: 186  DRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRY 245

Query: 766  LLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIAESESEI 945
            LL DGV+LN SSSGATYFMEP+DA++LNN+EVRLS+SEK+EE  +L  L  EIA SES+I
Sbjct: 246  LLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIANSESDI 305

Query: 946  TYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS---------SNSKISLSVDI 1098
             +LL++I ++DL  ARAAYA+W++GVCP+    N E   S         +     L+VDI
Sbjct: 306  NHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDI 365

Query: 1099 EGMRHPV 1119
             G+RHP+
Sbjct: 366  VGIRHPL 372


>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  367 bits (941), Expect = 4e-99
 Identities = 197/367 (53%), Positives = 261/367 (71%), Gaps = 13/367 (3%)
 Frame = +1

Query: 58   KPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMGRTQ 237
            KPP  +   FFK    S+ +S      S+ +Q ETLK LEW ++C ++S+FTSTSMG   
Sbjct: 13   KPPRPL---FFKPRFCSNPNSPE----SNSLQAETLKTLEWGSVCKQLSAFTSTSMGSAA 65

Query: 238  ----NVKIGQSFEESQKLLNQTTAALLLPKKLDFEGVEDIKEIVRSAGLGELMSVRELCE 405
                 + IG++  +SQ+LL+QT+AA L+ + LDF GV D+ EI+  A  G L+++RELC 
Sbjct: 66   ALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVHDLTEILGVATSGHLLTIRELCT 125

Query: 406  VKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDCNLSVIL 585
            V+ TL A+R +F+ L+ VA+   +  R+  LL+ILQNCNF   LE KI FCIDC LS+IL
Sbjct: 126  VRHTLAAARELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIIL 185

Query: 586  DRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGIRASHRS 765
            DRASEDL+ IRSERK+N+  L+SL KE+S++IFQAGGID PLI  RRSRMC+GIRASHR 
Sbjct: 186  DRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRY 245

Query: 766  LLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIAESESEI 945
            LL DGV+LN SSSGATYFMEP+DA++LNN+EVRLS+SEK+EE  +L  L  EIA SES+I
Sbjct: 246  LLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIANSESDI 305

Query: 946  TYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS---------SNSKISLSVDI 1098
             +LL++I ++DL  ARAAYA+W++GVCP+    N E   S         +     L+VDI
Sbjct: 306  NHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDI 365

Query: 1099 EGMRHPV 1119
             G+RHP+
Sbjct: 366  VGIRHPL 372


>ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
            gi|355503328|gb|AES84531.1| MutS2 family protein
            [Medicago truncatula]
          Length = 913

 Score =  367 bits (941), Expect = 4e-99
 Identities = 200/373 (53%), Positives = 269/373 (72%), Gaps = 13/373 (3%)
 Frame = +1

Query: 40   NFFISIKPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTST 219
            N FI I  P  I    FK     S  S +       +Q ++LK LEW++IC ++S+FTST
Sbjct: 6    NLFIPINKP-SIHRLSFKPRFCYSTESNS-------VQSDSLKTLEWNSICKQLSAFTST 57

Query: 220  SMGRTQ----NVKIGQSFEESQKLLNQTTAALLLPKK-LDFEGVEDIKEIVRSAGLGELM 384
            SMG +      + +G +   SQKLL+QT+AA L+P++ LDF G+ D+ +I+  +  G+L+
Sbjct: 58   SMGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQLDFSGIHDLTDILSVSVSGKLL 117

Query: 385  SVRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCID 564
            +V ELC V+RTL ++R +F+ L  +A+   +S+R+S LLEILQNCNFL  LE +I FCID
Sbjct: 118  TVPELCTVRRTLSSARELFDTLRHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCID 177

Query: 565  CNLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIG 744
            CNL VILDRASEDL+ IRSERK+N+  L+SL KE+S++IF+AGGID P IT RRSRMC+G
Sbjct: 178  CNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVG 237

Query: 745  IRASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEI 924
            IRAS+R LL +G++LNASSSGATYFMEP++A++LNNMEVRLSNSE +EE A+L  L  EI
Sbjct: 238  IRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEI 297

Query: 925  AESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS--SNSKIS----- 1083
            A S+SEI YLL++I E+DL  ARAAYA+W++GVCP+      E   S   ++ IS     
Sbjct: 298  ANSKSEINYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLEVCESVEKDNDISVVQDD 357

Query: 1084 -LSVDIEGMRHPV 1119
             L+V+IEGMRHP+
Sbjct: 358  DLTVNIEGMRHPL 370