BLASTX nr result
ID: Coptis24_contig00022710
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022710 (1173 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativ... 377 e-102 ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2... 374 e-101 ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly... 367 4e-99 ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly... 367 4e-99 ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g... 367 4e-99 >ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus] gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus] Length = 890 Score = 377 bits (968), Expect = e-102 Identities = 196/364 (53%), Positives = 270/364 (74%), Gaps = 9/364 (2%) Frame = +1 Query: 55 IKPPFKI--THTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMG 228 ++P F + TH F IA+S + K ETL++LEW +IC ++S FTSTSMG Sbjct: 21 LRPVFSLSTTHELMPFRIATSQTLKN----------ETLRVLEWSSICKQLSKFTSTSMG 70 Query: 229 ----RTQNVKIGQSFEESQKLLNQTTAA---LLLPKKLDFEGVEDIKEIVRSAGLGELMS 387 + +V+ G++ EESQKLL+QTTAA + ++LDF G+ED+ I+ SA G+L++ Sbjct: 71 FDVAQKADVRFGRTREESQKLLDQTTAAEAVVSTSRRLDFSGIEDVSGILNSAISGKLLT 130 Query: 388 VRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDC 567 + ELC V+RTL A+R +FE+L+++A YS+R L+EILQNC+FL ELE KI FCIDC Sbjct: 131 IAELCSVRRTLKAARELFEELQALAVGNHYSDRFLPLIEILQNCDFLVELERKIEFCIDC 190 Query: 568 NLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGI 747 N S+ILDRASEDL+ IR E+K+NM L+SL KE+S KI+QAGGID PLIT RRSRMC+ + Sbjct: 191 NYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMCVAV 250 Query: 748 RASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIA 927 RA+H++L+SDG++L+ SSSGATYFMEP++AV+LNNMEVRLSNSEK+EE+++L L+ EI+ Sbjct: 251 RATHKNLVSDGILLSTSSSGATYFMEPKNAVDLNNMEVRLSNSEKAEEISILSMLSTEIS 310 Query: 928 ESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRSSNSKISLSVDIEGM 1107 ESE+ I LL++I E+DL ARAAY RW+ GVCP E + SS + +LSVDI+ + Sbjct: 311 ESENHIRCLLDKILELDLALARAAYGRWMSGVCPCFSAKGYEGLNSSITDNTLSVDIDAI 370 Query: 1108 RHPV 1119 ++P+ Sbjct: 371 QNPL 374 >ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa] Length = 908 Score = 374 bits (961), Expect = e-101 Identities = 212/379 (55%), Positives = 269/379 (70%), Gaps = 15/379 (3%) Frame = +1 Query: 28 MDSTNFFISIKPPFKITHTFFKFSIASSNSSKTK---------TRVSSKIQKETLKILEW 180 M+ +N FISIK K FF S + TK T + +Q ETLKILEW Sbjct: 1 MELSNHFISIK---KSPILFFTTKPPFSTKALTKPFDSHSPKLTSPAHSLQLETLKILEW 57 Query: 181 DTICSKVSSFTSTSMGR--TQNVKI--GQSFEESQKLLNQTTAALLLPKK--LDFEGVED 342 ++C++++ FTSTSMG+ T+N KI G+S EESQKLL+QT AAL + + LDF G+ED Sbjct: 58 SSLCNQLTPFTSTSMGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGIED 117 Query: 343 IKEIVRSAGLGELMSVRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCN 522 I I+ SA G L++V ELC V+RTL A+R V E+L+ + G S R++ LLEILQNC+ Sbjct: 118 ITRILDSAVSGTLLTVGELCAVRRTLRAARAVLERLK---DSGDCSERYAPLLEILQNCS 174 Query: 523 FLTELEHKIGFCIDCNLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGID 702 F ELE K+GFCIDCNLS ILDRASEDL+ IRSERK+NM NL+ L K IS +IFQAGGID Sbjct: 175 FQIELEKKVGFCIDCNLSKILDRASEDLEIIRSERKRNMENLDRLLKGISARIFQAGGID 234 Query: 703 TPLITIRRSRMCIGIRASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEK 882 PL+T RRSR+C+G+RASHR L+ DGV+LN SSSG TYFMEP +AVELNN+EV LS+SEK Sbjct: 235 KPLVTKRRSRLCVGVRASHRYLIPDGVVLNVSSSGVTYFMEPGEAVELNNLEVMLSDSEK 294 Query: 883 SEELAVLKKLTFEIAESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVR 1062 +EE+A+L LT EIAES +I Y+L+ I E+DL ARAAYA W++GV P+ + Sbjct: 295 AEEIAILSLLTSEIAESARDIKYMLDGIIEVDLSFARAAYAYWMNGVRPIWTSEGCGGIS 354 Query: 1063 SSNSKISLSVDIEGMRHPV 1119 SS LS+DIEG+RHP+ Sbjct: 355 SSGGDYLLSIDIEGIRHPL 373 >ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max] Length = 902 Score = 367 bits (941), Expect = 4e-99 Identities = 197/367 (53%), Positives = 261/367 (71%), Gaps = 13/367 (3%) Frame = +1 Query: 58 KPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMGRTQ 237 KPP + FFK S+ +S S+ +Q ETLK LEW ++C ++S+FTSTSMG Sbjct: 13 KPPRPL---FFKPRFCSNPNSPE----SNSLQAETLKTLEWGSVCKQLSAFTSTSMGSAA 65 Query: 238 ----NVKIGQSFEESQKLLNQTTAALLLPKKLDFEGVEDIKEIVRSAGLGELMSVRELCE 405 + IG++ +SQ+LL+QT+AA L+ + LDF GV D+ EI+ A G L+++RELC Sbjct: 66 ALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVHDLTEILGVATSGHLLTIRELCT 125 Query: 406 VKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDCNLSVIL 585 V+ TL A+R +F+ L+ VA+ + R+ LL+ILQNCNF LE KI FCIDC LS+IL Sbjct: 126 VRHTLAAARELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIIL 185 Query: 586 DRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGIRASHRS 765 DRASEDL+ IRSERK+N+ L+SL KE+S++IFQAGGID PLI RRSRMC+GIRASHR Sbjct: 186 DRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRY 245 Query: 766 LLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIAESESEI 945 LL DGV+LN SSSGATYFMEP+DA++LNN+EVRLS+SEK+EE +L L EIA SES+I Sbjct: 246 LLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIANSESDI 305 Query: 946 TYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS---------SNSKISLSVDI 1098 +LL++I ++DL ARAAYA+W++GVCP+ N E S + L+VDI Sbjct: 306 NHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDI 365 Query: 1099 EGMRHPV 1119 G+RHP+ Sbjct: 366 VGIRHPL 372 >ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max] Length = 914 Score = 367 bits (941), Expect = 4e-99 Identities = 197/367 (53%), Positives = 261/367 (71%), Gaps = 13/367 (3%) Frame = +1 Query: 58 KPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTSTSMGRTQ 237 KPP + FFK S+ +S S+ +Q ETLK LEW ++C ++S+FTSTSMG Sbjct: 13 KPPRPL---FFKPRFCSNPNSPE----SNSLQAETLKTLEWGSVCKQLSAFTSTSMGSAA 65 Query: 238 ----NVKIGQSFEESQKLLNQTTAALLLPKKLDFEGVEDIKEIVRSAGLGELMSVRELCE 405 + IG++ +SQ+LL+QT+AA L+ + LDF GV D+ EI+ A G L+++RELC Sbjct: 66 ALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVHDLTEILGVATSGHLLTIRELCT 125 Query: 406 VKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCIDCNLSVIL 585 V+ TL A+R +F+ L+ VA+ + R+ LL+ILQNCNF LE KI FCIDC LS+IL Sbjct: 126 VRHTLAAARELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIIL 185 Query: 586 DRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIGIRASHRS 765 DRASEDL+ IRSERK+N+ L+SL KE+S++IFQAGGID PLI RRSRMC+GIRASHR Sbjct: 186 DRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRY 245 Query: 766 LLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEIAESESEI 945 LL DGV+LN SSSGATYFMEP+DA++LNN+EVRLS+SEK+EE +L L EIA SES+I Sbjct: 246 LLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIANSESDI 305 Query: 946 TYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS---------SNSKISLSVDI 1098 +LL++I ++DL ARAAYA+W++GVCP+ N E S + L+VDI Sbjct: 306 NHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDI 365 Query: 1099 EGMRHPV 1119 G+RHP+ Sbjct: 366 VGIRHPL 372 >ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula] Length = 913 Score = 367 bits (941), Expect = 4e-99 Identities = 200/373 (53%), Positives = 269/373 (72%), Gaps = 13/373 (3%) Frame = +1 Query: 40 NFFISIKPPFKITHTFFKFSIASSNSSKTKTRVSSKIQKETLKILEWDTICSKVSSFTST 219 N FI I P I FK S S + +Q ++LK LEW++IC ++S+FTST Sbjct: 6 NLFIPINKP-SIHRLSFKPRFCYSTESNS-------VQSDSLKTLEWNSICKQLSAFTST 57 Query: 220 SMGRTQ----NVKIGQSFEESQKLLNQTTAALLLPKK-LDFEGVEDIKEIVRSAGLGELM 384 SMG + + +G + SQKLL+QT+AA L+P++ LDF G+ D+ +I+ + G+L+ Sbjct: 58 SMGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQLDFSGIHDLTDILSVSVSGKLL 117 Query: 385 SVRELCEVKRTLGASRRVFEQLESVANDGGYSNRHSSLLEILQNCNFLTELEHKIGFCID 564 +V ELC V+RTL ++R +F+ L +A+ +S+R+S LLEILQNCNFL LE +I FCID Sbjct: 118 TVPELCTVRRTLSSARELFDTLRHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCID 177 Query: 565 CNLSVILDRASEDLKNIRSERKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCIG 744 CNL VILDRASEDL+ IRSERK+N+ L+SL KE+S++IF+AGGID P IT RRSRMC+G Sbjct: 178 CNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVG 237 Query: 745 IRASHRSLLSDGVILNASSSGATYFMEPRDAVELNNMEVRLSNSEKSEELAVLKKLTFEI 924 IRAS+R LL +G++LNASSSGATYFMEP++A++LNNMEVRLSNSE +EE A+L L EI Sbjct: 238 IRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEI 297 Query: 925 AESESEITYLLERITEMDLVSARAAYARWVHGVCPVIDKANSEYVRS--SNSKIS----- 1083 A S+SEI YLL++I E+DL ARAAYA+W++GVCP+ E S ++ IS Sbjct: 298 ANSKSEINYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLEVCESVEKDNDISVVQDD 357 Query: 1084 -LSVDIEGMRHPV 1119 L+V+IEGMRHP+ Sbjct: 358 DLTVNIEGMRHPL 370