BLASTX nr result

ID: Coptis24_contig00022698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022698
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   415   e-114
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   352   6e-95
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   351   1e-94
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   351   1e-94
ref|NP_001190549.1| inactive beta-amylase 4 [Arabidopsis thalian...   351   1e-94

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
            gi|296089917|emb|CBI39736.3| unnamed protein product
            [Vitis vinifera]
          Length = 522

 Score =  415 bits (1067), Expect = e-114
 Identities = 195/244 (79%), Positives = 214/244 (87%), Gaps = 3/244 (1%)
 Frame = +1

Query: 1    GEFQCYDKYMMEDLQRAACLEGQPEWGDKGPQNAGYYNSLPSGVPFFEDGGESFSSDYGQ 180
            GEFQCYDKYMM DL+ AAC EG+P+WGDKGPQNAGYYNSLPSGVPFFE+G ESF SDYG+
Sbjct: 279  GEFQCYDKYMMRDLKIAACQEGKPQWGDKGPQNAGYYNSLPSGVPFFEEGQESFLSDYGR 338

Query: 181  FFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAKIGGIYWWYQTESHPAELSA 360
            FFLEWYSGRLI HADAIL KAAN+  KYQ +   +VLLVAKIGGIYWWY T SHPAEL+A
Sbjct: 339  FFLEWYSGRLIRHADAILTKAANMLKKYQESKKSSVLLVAKIGGIYWWYHTLSHPAELTA 398

Query: 361  GYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHYRCSPEGLLQQIRKVSKERI 540
            GYYNTALRDGYDP+AS+LSRHGAALH+SCLEMMD+ETP  Y CSPE LLQQI  VSK+RI
Sbjct: 399  GYYNTALRDGYDPVASMLSRHGAALHISCLEMMDNETPPTYLCSPERLLQQIWTVSKKRI 458

Query: 541  IHLTGRNTNERFDKAGLWQIMANCYQAQA---GSFTYFRMNDKIFRVENWNNFLPFVRRM 711
            +HLTGRNTNERFDKAGLWQI ANCY  QA    SFTYFRMN+KIFR ENWNNF+PFVR+M
Sbjct: 459  VHLTGRNTNERFDKAGLWQIHANCYHPQAEAVRSFTYFRMNEKIFRAENWNNFVPFVRKM 518

Query: 712  HTDL 723
             TD+
Sbjct: 519  STDM 522


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
            gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  352 bits (903), Expect = 6e-95
 Identities = 165/244 (67%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
 Frame = +1

Query: 1    GEFQCYDKYMMEDLQRAACLEGQPEWGDKGPQNAGYYNSLPSGVPFFEDGGESFSSDYGQ 180
            GEFQC+DKYMMEDL   A  EG+P+WG + P N G YNS PSGVPFFE+G +SF SDYG+
Sbjct: 288  GEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGR 347

Query: 181  FFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAKIGGIYWWYQTESHPAELSA 360
            FFLEWYSG+LI HADAIL KAA+V  + Q +   +V+LVAKIGGIYWWY+T SHPAEL+A
Sbjct: 348  FFLEWYSGKLICHADAILAKAADVLRRRQEDEKSSVMLVAKIGGIYWWYKTSSHPAELTA 407

Query: 361  GYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHYRCSPEGLLQQIRKVSKERI 540
            GYYNTALRDGYDP+ASVLSRHGAALH+ CL+M DSETP  Y CSPEGL +QI  VSK+  
Sbjct: 408  GYYNTALRDGYDPVASVLSRHGAALHIPCLDMADSETPEKYLCSPEGLRKQIHDVSKKWT 467

Query: 541  IHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMNDKIFRVENWNNFLPFVRRM 711
            I +TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN+KIFR ENWNNF+PF+R+M
Sbjct: 468  IQVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRGENWNNFVPFIRQM 527

Query: 712  HTDL 723
              D+
Sbjct: 528  SADM 531


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  351 bits (901), Expect = 1e-94
 Identities = 164/244 (67%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
 Frame = +1

Query: 1   GEFQCYDKYMMEDLQRAACLEGQPEWGDKGPQNAGYYNSLPSGVPFFEDGGESFSSDYGQ 180
           GEFQC+DKYMMEDL   A  EG+P+WG + P N G YNS PSGVPFFE+G +SF SDYG+
Sbjct: 241 GEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGR 300

Query: 181 FFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAKIGGIYWWYQTESHPAELSA 360
           FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAKIGGIYWWY+T SHPAEL+A
Sbjct: 301 FFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTA 360

Query: 361 GYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHYRCSPEGLLQQIRKVSKERI 540
           GYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y CSPEGL +QI  VSK+  
Sbjct: 361 GYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWT 420

Query: 541 IHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMNDKIFRVENWNNFLPFVRRM 711
           IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN+KIFRVENWNNF+PF+R+M
Sbjct: 421 IHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQM 480

Query: 712 HTDL 723
             D+
Sbjct: 481 SADM 484


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
            gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName: Full=Inactive
            beta-amylase 4, chloroplastic; AltName: Full=Inactive
            beta-amylase 6; Flags: Precursor
            gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
            thaliana] gi|332009286|gb|AED96669.1| inactive
            beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  351 bits (901), Expect = 1e-94
 Identities = 164/244 (67%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
 Frame = +1

Query: 1    GEFQCYDKYMMEDLQRAACLEGQPEWGDKGPQNAGYYNSLPSGVPFFEDGGESFSSDYGQ 180
            GEFQC+DKYMMEDL   A  EG+P+WG + P N G YNS PSGVPFFE+G +SF SDYG+
Sbjct: 288  GEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGR 347

Query: 181  FFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAKIGGIYWWYQTESHPAELSA 360
            FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAKIGGIYWWY+T SHPAEL+A
Sbjct: 348  FFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTA 407

Query: 361  GYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHYRCSPEGLLQQIRKVSKERI 540
            GYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y CSPEGL +QI  VSK+  
Sbjct: 408  GYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWT 467

Query: 541  IHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMNDKIFRVENWNNFLPFVRRM 711
            IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN+KIFRVENWNNF+PF+R+M
Sbjct: 468  IHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQM 527

Query: 712  HTDL 723
              D+
Sbjct: 528  SADM 531


>ref|NP_001190549.1| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|332009287|gb|AED96670.1| inactive beta-amylase 4
           [Arabidopsis thaliana]
          Length = 489

 Score =  351 bits (901), Expect = 1e-94
 Identities = 164/244 (67%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
 Frame = +1

Query: 1   GEFQCYDKYMMEDLQRAACLEGQPEWGDKGPQNAGYYNSLPSGVPFFEDGGESFSSDYGQ 180
           GEFQC+DKYMMEDL   A  EG+P+WG + P N G YNS PSGVPFFE+G +SF SDYG+
Sbjct: 246 GEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGR 305

Query: 181 FFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAKIGGIYWWYQTESHPAELSA 360
           FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAKIGGIYWWY+T SHPAEL+A
Sbjct: 306 FFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTA 365

Query: 361 GYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHYRCSPEGLLQQIRKVSKERI 540
           GYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y CSPEGL +QI  VSK+  
Sbjct: 366 GYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWT 425

Query: 541 IHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMNDKIFRVENWNNFLPFVRRM 711
           IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN+KIFRVENWNNF+PF+R+M
Sbjct: 426 IHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQM 485

Query: 712 HTDL 723
             D+
Sbjct: 486 SADM 489


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