BLASTX nr result

ID: Coptis24_contig00022680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022680
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517196.1| glucose-1-phosphate adenylyltransferase, put...   409   e-112
ref|XP_002311802.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|XP_002281069.1| PREDICTED: glucose-1-phosphate adenylyltrans...   403   e-110
ref|NP_001241391.1| uncharacterized protein LOC100810451 [Glycin...   399   e-109
ref|XP_004164723.1| PREDICTED: glucose-1-phosphate adenylyltrans...   396   e-108

>ref|XP_002517196.1| glucose-1-phosphate adenylyltransferase, putative [Ricinus
           communis] gi|223543831|gb|EEF45359.1|
           glucose-1-phosphate adenylyltransferase, putative
           [Ricinus communis]
          Length = 533

 Score =  409 bits (1050), Expect = e-112
 Identities = 207/267 (77%), Positives = 230/267 (86%), Gaps = 7/267 (2%)
 Frame = -3

Query: 782 NGRLGKFSNGELMGKKLLNLSQLHH----SKASGNSNGRFVCMSV---LTNNVAAETKXX 624
           N RL KF NGELMG KL  L+QLH     + +S +S+G+ V   V   LT N+AA+ K  
Sbjct: 30  NIRLVKFGNGELMGSKL-KLTQLHQRASTTSSSNSSSGKVVKQHVSMSLTTNIAADYKLR 88

Query: 623 XXXXXXXDPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINK 444
                  DPRTV AIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINK
Sbjct: 89  DLEMEKRDPRTVVAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINK 148

Query: 443 IYILTQYNSASLNRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQF 264
           +YILTQ+NSASLNRHLARAYNFGNGI+FGDGFVE LAATQTPGE GK+WFQGTADAVRQF
Sbjct: 149 VYILTQFNSASLNRHLARAYNFGNGINFGDGFVEVLAATQTPGEAGKRWFQGTADAVRQF 208

Query: 263 HWLFEDARSREIEDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLM 84
           HWLFEDARS++I+D+++LSGDHLYRMDYMDF+QNHR+SGADIT+SCLPMDDSRASDFGLM
Sbjct: 209 HWLFEDARSKDIDDVLVLSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLM 268

Query: 83  KIDSKGRVLSFSEKPKGNNLKAMEVDT 3
            ID+KGRVLSFSEKPKG +LKAM VDT
Sbjct: 269 NIDNKGRVLSFSEKPKGADLKAMAVDT 295


>ref|XP_002311802.1| predicted protein [Populus trichocarpa] gi|222851622|gb|EEE89169.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  405 bits (1040), Expect = e-111
 Identities = 207/260 (79%), Positives = 225/260 (86%), Gaps = 2/260 (0%)
 Frame = -3

Query: 776 RLGKFSNGELMGKKLLNLSQLHH--SKASGNSNGRFVCMSVLTNNVAAETKXXXXXXXXX 603
           RL KF NGELMG KL  L+QLH   S  +     + VCMS LT +VA E++         
Sbjct: 33  RLVKFGNGELMGNKL-KLNQLHQGTSTLAVRIPKQQVCMS-LTTDVAMESRLRDLEMEKR 90

Query: 602 DPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKIYILTQY 423
           DPRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGG+YRLIDVPMSNCINSGINK+YILTQY
Sbjct: 91  DPRTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGSYRLIDVPMSNCINSGINKVYILTQY 150

Query: 422 NSASLNRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQFHWLFEDA 243
           NSASLNRHLARAYN GNG+SFGDGFVEALAATQTPGE GK+WFQGTADAVRQFHWLFE  
Sbjct: 151 NSASLNRHLARAYNLGNGVSFGDGFVEALAATQTPGEAGKKWFQGTADAVRQFHWLFEGP 210

Query: 242 RSREIEDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLMKIDSKGR 63
           RS+EIED++ILSGDHLYRMDYMDF+QNHR+ GADITLSCLPMDDSRASDFGLMKID+KGR
Sbjct: 211 RSKEIEDVLILSGDHLYRMDYMDFVQNHRQGGADITLSCLPMDDSRASDFGLMKIDNKGR 270

Query: 62  VLSFSEKPKGNNLKAMEVDT 3
           VLSFSEKPKG +LKAMEVDT
Sbjct: 271 VLSFSEKPKGVDLKAMEVDT 290


>ref|XP_002281069.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1,
           chloroplastic [Vitis vinifera]
          Length = 520

 Score =  403 bits (1036), Expect = e-110
 Identities = 201/255 (78%), Positives = 227/255 (89%)
 Frame = -3

Query: 767 KFSNGELMGKKLLNLSQLHHSKASGNSNGRFVCMSVLTNNVAAETKXXXXXXXXXDPRTV 588
           KF NGE+MGKKL  ++QL   +    S G+ VCMS+ T+ VAA++K         DPRTV
Sbjct: 32  KFCNGEMMGKKL-KMTQLGMFR--NKSVGKHVCMSLATD-VAADSKLRDLEMEKRDPRTV 87

Query: 587 AAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKIYILTQYNSASL 408
            A+ILGGGAGTRLFPLTKRRAKPAVPIGG+YRLIDVPMSNCINSGINK+YILTQ+NSASL
Sbjct: 88  VAVILGGGAGTRLFPLTKRRAKPAVPIGGSYRLIDVPMSNCINSGINKVYILTQFNSASL 147

Query: 407 NRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQFHWLFEDARSREI 228
           NRHLARAYNFG+G++FGDG+VEALAATQTPGE GK+WFQGTADAVRQFHWLFED RS+EI
Sbjct: 148 NRHLARAYNFGHGVNFGDGYVEALAATQTPGEAGKRWFQGTADAVRQFHWLFEDQRSKEI 207

Query: 227 EDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLMKIDSKGRVLSFS 48
           ED++ILSGDHLYRMDYMDF+QNHR+SGADIT+SCLPMDDSRASDFGLMKID+KGRVL FS
Sbjct: 208 EDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIDNKGRVLFFS 267

Query: 47  EKPKGNNLKAMEVDT 3
           EKPKG +LKAMEVDT
Sbjct: 268 EKPKGEDLKAMEVDT 282


>ref|NP_001241391.1| uncharacterized protein LOC100810451 [Glycine max]
           gi|255639628|gb|ACU20108.1| unknown [Glycine max]
          Length = 520

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/260 (76%), Positives = 223/260 (85%)
 Frame = -3

Query: 782 NGRLGKFSNGELMGKKLLNLSQLHHSKASGNSNGRFVCMSVLTNNVAAETKXXXXXXXXX 603
           N +L KF NGE+MG+KLL L     S        + +CMS LT +V+ E+K         
Sbjct: 25  NWKLVKFCNGEVMGRKLL-LKNGGGSTKDFKRQQQHICMS-LTADVSTESKLRDLDMERR 82

Query: 602 DPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKIYILTQY 423
           +PRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINK+YILTQ+
Sbjct: 83  NPRTVLAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQF 142

Query: 422 NSASLNRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQFHWLFEDA 243
           NSASLNRH+ARAYN GNG++FGDG+VE LAATQTPGE GK+WFQGTADAVRQFHWLFED 
Sbjct: 143 NSASLNRHIARAYNSGNGVTFGDGYVEVLAATQTPGEAGKKWFQGTADAVRQFHWLFEDP 202

Query: 242 RSREIEDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLMKIDSKGR 63
           RS++IED++ILSGDHLYRMDYMDF+QNHRESGADITLSCLPMDDSRASDFGLMKID+KGR
Sbjct: 203 RSKDIEDVLILSGDHLYRMDYMDFVQNHRESGADITLSCLPMDDSRASDFGLMKIDNKGR 262

Query: 62  VLSFSEKPKGNNLKAMEVDT 3
           VLSFSEKPKG  LKAM+VDT
Sbjct: 263 VLSFSEKPKGEELKAMQVDT 282


>ref|XP_004164723.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1,
           chloroplastic-like [Cucumis sativus]
          Length = 522

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/255 (76%), Positives = 214/255 (83%)
 Frame = -3

Query: 767 KFSNGELMGKKLLNLSQLHHSKASGNSNGRFVCMSVLTNNVAAETKXXXXXXXXXDPRTV 588
           +F NGE MGKKL    ++  +  + N   R VCMS+ TN    +           DPRTV
Sbjct: 30  EFGNGEFMGKKLTEPKRVPAAAVAINGVRRRVCMSLTTNVAIGDAALREMDMEKRDPRTV 89

Query: 587 AAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKIYILTQYNSASL 408
            AIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINK+YILTQ+NSASL
Sbjct: 90  VAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASL 149

Query: 407 NRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQFHWLFEDARSREI 228
           NRHLARAYNF  G++FGDG+VE LAATQTPGE GK WFQGTADAVRQFHWLFEDARS+ I
Sbjct: 150 NRHLARAYNFSGGVTFGDGYVEVLAATQTPGEAGKNWFQGTADAVRQFHWLFEDARSKNI 209

Query: 227 EDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLMKIDSKGRVLSFS 48
           ED++ILSGDHLYRMDYMDF+QNHR+SGADITLSCLPMDDSRASDFGLMKID KGR++SFS
Sbjct: 210 EDVLILSGDHLYRMDYMDFVQNHRQSGADITLSCLPMDDSRASDFGLMKIDEKGRIISFS 269

Query: 47  EKPKGNNLKAMEVDT 3
           EKPKG +LKAM VDT
Sbjct: 270 EKPKGQDLKAMAVDT 284


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