BLASTX nr result
ID: Coptis24_contig00022674
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022674 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004160655.1| PREDICTED: SWI/SNF-related matrix-associated... 94 5e-21 ref|XP_004147667.1| PREDICTED: SWI/SNF-related matrix-associated... 94 5e-21 gb|ADN34041.1| chromatin remodelling complex ATPase chain isw-1 ... 93 1e-20 ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated... 97 1e-18 ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated... 97 1e-18 >ref|XP_004160655.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Cucumis sativus] Length = 725 Score = 94.4 bits (233), Expect(2) = 5e-21 Identities = 47/57 (82%), Positives = 52/57 (91%) Frame = -3 Query: 171 FRRKKASKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRVHHIGQVASV 1 F++K + AAVLSIKAGGVGLTLTAASTVIFAELSWTPGD+IQAEDR H IGQV+SV Sbjct: 588 FQQKDSIMAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 644 Score = 31.6 bits (70), Expect(2) = 5e-21 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 214 GGTPASSRQALVTNFQEKEGI 152 GGTP + RQALV+ FQ+K+ I Sbjct: 574 GGTPPAMRQALVSEFQQKDSI 594 >ref|XP_004147667.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Cucumis sativus] Length = 725 Score = 94.4 bits (233), Expect(2) = 5e-21 Identities = 47/57 (82%), Positives = 52/57 (91%) Frame = -3 Query: 171 FRRKKASKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRVHHIGQVASV 1 F++K + AAVLSIKAGGVGLTLTAASTVIFAELSWTPGD+IQAEDR H IGQV+SV Sbjct: 588 FQQKDSIMAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 644 Score = 31.6 bits (70), Expect(2) = 5e-21 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 214 GGTPASSRQALVTNFQEKEGI 152 GGTP + RQALV+ FQ+K+ I Sbjct: 574 GGTPPAMRQALVSEFQQKDSI 594 >gb|ADN34041.1| chromatin remodelling complex ATPase chain isw-1 [Cucumis melo subsp. melo] Length = 385 Score = 92.8 bits (229), Expect(2) = 1e-20 Identities = 46/57 (80%), Positives = 51/57 (89%) Frame = -3 Query: 171 FRRKKASKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRVHHIGQVASV 1 F++K + AAVLSIKAGGVGLTLTAASTVIF ELSWTPGD+IQAEDR H IGQV+SV Sbjct: 248 FQQKDSIMAAVLSIKAGGVGLTLTAASTVIFTELSWTPGDLIQAEDRAHRIGQVSSV 304 Score = 32.0 bits (71), Expect(2) = 1e-20 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -2 Query: 214 GGTPASSRQALVTNFQEKEGI 152 GGTP + RQALV++FQ+K+ I Sbjct: 234 GGTPPAMRQALVSDFQQKDSI 254 >ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Glycine max] Length = 751 Score = 97.4 bits (241), Expect = 1e-18 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = -3 Query: 171 FRRKKASKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRVHHIGQVASV 1 F+ K A KAAVLSIKAGGVGLTLTAASTVIFAELSWTPGD+IQAEDR H IGQV+SV Sbjct: 594 FQEKDAIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 650 >ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Vitis vinifera] gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera] Length = 677 Score = 97.4 bits (241), Expect = 1e-18 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = -3 Query: 171 FRRKKASKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRVHHIGQVASV 1 F+ K KAAVLSIKAGGVGLTLTAASTVIFAELSWTPGD+IQAEDRVH IGQV+SV Sbjct: 543 FQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHRIGQVSSV 599