BLASTX nr result

ID: Coptis24_contig00022669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022669
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263099.2| PREDICTED: uncharacterized protein LOC100247...    72   6e-11
ref|XP_002527741.1| conserved hypothetical protein [Ricinus comm...    64   2e-08

>ref|XP_002263099.2| PREDICTED: uncharacterized protein LOC100247807 [Vitis vinifera]
           gi|297740397|emb|CBI30579.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
 Frame = -1

Query: 346 MSAGVCGKRVGFE----SSPTSGSANK--RFRRSIRSSEFGFWGSEDXXXXXXXXXXXXX 185
           MSAGVCGKRVGFE    SS TS   ++   F   +RSS+FG  GS+D             
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSTSSKRSRCSTFGSPVRSSDFGS-GSDD------------- 46

Query: 184 XXXXXXXXXXXXXXXXXXXXKLSHLMNMFPSMNRELVESVLNNHNQKVEDAVESLQKLLL 5
                                +S L+ MFP+++RE+VE+VL  HN K+EDA+ESL  L L
Sbjct: 47  --------------------SVSVLLQMFPNLDREMVETVLRTHNNKIEDAIESLHALSL 86

Query: 4   G 2
           G
Sbjct: 87  G 87


>ref|XP_002527741.1| conserved hypothetical protein [Ricinus communis]
           gi|223532882|gb|EEF34654.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 47/120 (39%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
 Frame = -1

Query: 346 MSAGVCGKRVGFESSPTSGSANKRFRRS-----IRSSEFGFWGSEDXXXXXXXXXXXXXX 182
           MSAGVCGKRVGFE    S SA KR R S      RS++FG  GS+D              
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSAAKRSRCSGFGSPTRSTDFGS-GSDDT------------- 46

Query: 181 XXXXXXXXXXXXXXXXXXXKLSHLMNMFPSMNRELVESVLNNHNQKVEDAVESLQKLLLG 2
                               L  L+ MFPS++ ELV +   NHN KV+DAV++L K+  G
Sbjct: 47  --------------------LFTLLQMFPSLDPELVRTAHRNHNNKVDDAVKTLMKISFG 86


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