BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022656
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [S...   616   e-174
ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Br...   613   e-173
dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]          612   e-173
ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group] g...   612   e-173
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   612   e-173

>ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
            gi|241929513|gb|EES02658.1| hypothetical protein
            SORBIDRAFT_03g009030 [Sorghum bicolor]
          Length = 1208

 Score =  616 bits (1589), Expect = e-174
 Identities = 299/329 (90%), Positives = 315/329 (95%)
 Frame = +3

Query: 3    KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVF 182
            KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVF
Sbjct: 541  KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 600

Query: 183  PGKLGVLPVFEAEFAVPISVGGYSNATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH 362
            PGKLGVLPVFE EF+VPI+VGGY+NATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA 
Sbjct: 601  PGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQ 660

Query: 363  LPKKTEHVLFCSLTMEQRSIYRSFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLERE 542
            LPKKTEHVLFCSLT EQRS YR+FLASSEVEQIFDGNRNSLYGIDV+RKICNHPDLLERE
Sbjct: 661  LPKKTEHVLFCSLTPEQRSTYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLERE 720

Query: 543  HSSNNPDYGNPVRSGKMKVATQVLKVWKDQGHRVLLFSQTQQMLDILESFLRAGDYTYRR 722
            H++ NPDYGNP RSGKMKV  QVLKVWKDQGHRVLLF+QTQQMLDILE+FL A DY YRR
Sbjct: 721  HAAQNPDYGNPERSGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILENFLTACDYQYRR 780

Query: 723  MDGLTPVKQRMTLIDEFNNSNEVFVFILTTKVGGLGTNLIGANRVIIFDPDWNPSTDMQA 902
            MDGLTP KQRM LIDEFNN++E+FVFILTTKVGGLGTNL GANR+II+DPDWNPSTDMQA
Sbjct: 781  MDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQA 840

Query: 903  RERAWRIGQTRDVTIYRLITRGTIEEKVY 989
            RERAWRIGQTRDVT+YRLITRGTIEEKVY
Sbjct: 841  RERAWRIGQTRDVTVYRLITRGTIEEKVY 869


>ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Brachypodium distachyon]
          Length = 1218

 Score =  613 bits (1581), Expect = e-173
 Identities = 297/329 (90%), Positives = 314/329 (95%)
 Frame = +3

Query: 3    KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVF 182
            KLLDIEWGYAVLDEGHRIRNPNAE+TLVCKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVF
Sbjct: 551  KLLDIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 610

Query: 183  PGKLGVLPVFEAEFAVPISVGGYSNATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH 362
            PGKLGVLPVFE EF+VPI VGGY+NATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA 
Sbjct: 611  PGKLGVLPVFEIEFSVPIKVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQ 670

Query: 363  LPKKTEHVLFCSLTMEQRSIYRSFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLERE 542
            LPKKTEHVLFCSLT EQR+ YR+FLASSEVEQIFDGNRNSLYGIDV+RKICNHPDLLERE
Sbjct: 671  LPKKTEHVLFCSLTPEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLERE 730

Query: 543  HSSNNPDYGNPVRSGKMKVATQVLKVWKDQGHRVLLFSQTQQMLDILESFLRAGDYTYRR 722
            H++ +PDYGNP RSGKMKV  QVLKVWKDQGHRVLLF+QTQQMLDILE+FL A DY YRR
Sbjct: 731  HAAQDPDYGNPERSGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDILENFLTACDYPYRR 790

Query: 723  MDGLTPVKQRMTLIDEFNNSNEVFVFILTTKVGGLGTNLIGANRVIIFDPDWNPSTDMQA 902
            MDGLTP KQRM LIDEFNN++E+F+FILTTKVGGLGTNL GANRVIIFDPDWNPSTDMQA
Sbjct: 791  MDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQA 850

Query: 903  RERAWRIGQTRDVTIYRLITRGTIEEKVY 989
            RERAWRIGQTRDVT+YRLITRGTIEEKVY
Sbjct: 851  RERAWRIGQTRDVTVYRLITRGTIEEKVY 879


>dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]
          Length = 789

 Score =  612 bits (1579), Expect = e-173
 Identities = 294/329 (89%), Positives = 316/329 (96%)
 Frame = +3

Query: 3    KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVF 182
            KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVF
Sbjct: 121  KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 180

Query: 183  PGKLGVLPVFEAEFAVPISVGGYSNATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH 362
            PGKLGVLPVFEAEF+VPI+VGGY+NATPLQVSTAYRCAVVLRDL+MPYLLRRMKADVNA 
Sbjct: 181  PGKLGVLPVFEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQ 240

Query: 363  LPKKTEHVLFCSLTMEQRSIYRSFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLERE 542
            LPKKTEHVLFCSLT EQR+ YR+FLASSEVEQIFDGNRNSLYGIDV+RKICNHPDLLERE
Sbjct: 241  LPKKTEHVLFCSLTTEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLERE 300

Query: 543  HSSNNPDYGNPVRSGKMKVATQVLKVWKDQGHRVLLFSQTQQMLDILESFLRAGDYTYRR 722
            H++ NPDYGNP RSGKMKV  QVLKVWK+QGHRVLLF+QTQQMLDI+E+FL A +Y YRR
Sbjct: 301  HAAQNPDYGNPERSGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRR 360

Query: 723  MDGLTPVKQRMTLIDEFNNSNEVFVFILTTKVGGLGTNLIGANRVIIFDPDWNPSTDMQA 902
            MDGLTP KQRM LIDEFNN++E+F+FILTTKVGGLGTNL GANR+II+DPDWNPSTDMQA
Sbjct: 361  MDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQA 420

Query: 903  RERAWRIGQTRDVTIYRLITRGTIEEKVY 989
            RERAWRIGQTRDVT+YRLITRGTIEEKVY
Sbjct: 421  RERAWRIGQTRDVTVYRLITRGTIEEKVY 449


>ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group]
            gi|15128457|dbj|BAB62641.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|20804446|dbj|BAB92143.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B
            [Oryza sativa Japonica Group]
            gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa
            Japonica Group]
          Length = 1187

 Score =  612 bits (1579), Expect = e-173
 Identities = 294/329 (89%), Positives = 316/329 (96%)
 Frame = +3

Query: 3    KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVF 182
            KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVF
Sbjct: 519  KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 578

Query: 183  PGKLGVLPVFEAEFAVPISVGGYSNATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH 362
            PGKLGVLPVFEAEF+VPI+VGGY+NATPLQVSTAYRCAVVLRDL+MPYLLRRMKADVNA 
Sbjct: 579  PGKLGVLPVFEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQ 638

Query: 363  LPKKTEHVLFCSLTMEQRSIYRSFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLERE 542
            LPKKTEHVLFCSLT EQR+ YR+FLASSEVEQIFDGNRNSLYGIDV+RKICNHPDLLERE
Sbjct: 639  LPKKTEHVLFCSLTTEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLERE 698

Query: 543  HSSNNPDYGNPVRSGKMKVATQVLKVWKDQGHRVLLFSQTQQMLDILESFLRAGDYTYRR 722
            H++ NPDYGNP RSGKMKV  QVLKVWK+QGHRVLLF+QTQQMLDI+E+FL A +Y YRR
Sbjct: 699  HAAQNPDYGNPERSGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRR 758

Query: 723  MDGLTPVKQRMTLIDEFNNSNEVFVFILTTKVGGLGTNLIGANRVIIFDPDWNPSTDMQA 902
            MDGLTP KQRM LIDEFNN++E+F+FILTTKVGGLGTNL GANR+II+DPDWNPSTDMQA
Sbjct: 759  MDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQA 818

Query: 903  RERAWRIGQTRDVTIYRLITRGTIEEKVY 989
            RERAWRIGQTRDVT+YRLITRGTIEEKVY
Sbjct: 819  RERAWRIGQTRDVTVYRLITRGTIEEKVY 847


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  612 bits (1579), Expect = e-173
 Identities = 295/329 (89%), Positives = 314/329 (95%)
 Frame = +3

Query: 3    KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVF 182
            KLLDIEWGYAVLDEGHRIRNPNAE+TL+CKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVF
Sbjct: 549  KLLDIEWGYAVLDEGHRIRNPNAEVTLICKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 608

Query: 183  PGKLGVLPVFEAEFAVPISVGGYSNATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH 362
            PGKLGVLPVFEAEFAVPISVGGY+NA+PLQVSTAYRCAVVLRDLIMPYLLRRMK DVNA 
Sbjct: 609  PGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVNAQ 668

Query: 363  LPKKTEHVLFCSLTMEQRSIYRSFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLERE 542
            LPKKTEHVLFCSLT EQRS+YR+FLAS+EVEQI DG+RNSLYGIDVMRKICNHPDLLERE
Sbjct: 669  LPKKTEHVLFCSLTAEQRSVYRAFLASTEVEQIIDGSRNSLYGIDVMRKICNHPDLLERE 728

Query: 543  HSSNNPDYGNPVRSGKMKVATQVLKVWKDQGHRVLLFSQTQQMLDILESFLRAGDYTYRR 722
            HS  NPDYGNP RSGKM+V  QVLKVW++QGHRVLLF+QTQQMLDILE FL +G Y+YRR
Sbjct: 729  HSCQNPDYGNPDRSGKMRVVAQVLKVWREQGHRVLLFAQTQQMLDILEIFLNSGGYSYRR 788

Query: 723  MDGLTPVKQRMTLIDEFNNSNEVFVFILTTKVGGLGTNLIGANRVIIFDPDWNPSTDMQA 902
            MDGLTP+KQRM LIDEFNNSN+VF+FILTTKVGGLGTNL GANRVIIFDPDWNPSTDMQA
Sbjct: 789  MDGLTPIKQRMALIDEFNNSNDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQA 848

Query: 903  RERAWRIGQTRDVTIYRLITRGTIEEKVY 989
            RERAWRIGQ RDVT+YRLITRGTIEEKVY
Sbjct: 849  RERAWRIGQKRDVTVYRLITRGTIEEKVY 877