BLASTX nr result

ID: Coptis24_contig00022647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022647
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593307.1| Heat shock 70 kDa protein [Medicago truncatu...   129   2e-28
ref|XP_004147511.1| PREDICTED: heat shock 70 kDa protein, mitoch...   127   7e-28
ref|XP_002871379.1| mthsc70-2 [Arabidopsis lyrata subsp. lyrata]...   127   9e-28
ref|NP_196521.1| mitochondrial HSO70 2 [Arabidopsis thaliana] gi...   127   9e-28
ref|XP_002313955.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_003593307.1| Heat shock 70 kDa protein [Medicago truncatula]
           gi|124359205|gb|ABN05716.1| Chaperone DnaK [Medicago
           truncatula] gi|355482355|gb|AES63558.1| Heat shock 70
           kDa protein [Medicago truncatula]
          Length = 676

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/137 (50%), Positives = 95/137 (69%), Gaps = 8/137 (5%)
 Frame = -3

Query: 387 SETSKP-DTKEGVSDHIGISFGTTSICVAVFGGST-KVIVNS------PSIVAYVREGEY 232
           S  S+P  ++   +D IGI  GTT+ CV+V  G   KV+ NS      PS+VA+ ++GE 
Sbjct: 41  SSLSRPFSSRAAGNDVIGIDLGTTNSCVSVMEGKNPKVVENSEGARTTPSVVAFTQKGEL 100

Query: 231 VVGKEAQSWAGIDPKNTISGIQHLLGRKFNDPLVQKEMEMVPYNIVKAPNGDAWVEAHGK 52
           +VG  A+  A  +P+NTISG + L+GR+F+DP  QKEM+MVPY IVKAPNGDAWVEA G+
Sbjct: 101 LVGTPAKRQAVTNPENTISGAKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEAKGQ 160

Query: 51  QYSSTEIAAKLLANVKQ 1
           QYS ++I A +L  +K+
Sbjct: 161 QYSPSQIGAFVLTKMKE 177


>ref|XP_004147511.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Cucumis
           sativus] gi|449511372|ref|XP_004163938.1| PREDICTED:
           heat shock 70 kDa protein, mitochondrial-like [Cucumis
           sativus]
          Length = 680

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/140 (49%), Positives = 96/140 (68%), Gaps = 8/140 (5%)
 Frame = -3

Query: 396 KSHSETSKP-DTKEGVSDHIGISFGTTSICVAVFGGST-KVIVNS------PSIVAYVRE 241
           +S +  S+P  +K   +D IG+  GTT+ CVAV  G   KVI NS      PS+VA+ ++
Sbjct: 41  QSWASLSRPFSSKPAGNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGARTTPSVVAFNQK 100

Query: 240 GEYVVGKEAQSWAGIDPKNTISGIQHLLGRKFNDPLVQKEMEMVPYNIVKAPNGDAWVEA 61
           GE +VG  A+  A  +P NT+ G + L+GR+F+DP  QKEM+MVPY IVKAPNGDAWVEA
Sbjct: 101 GELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEA 160

Query: 60  HGKQYSSTEIAAKLLANVKQ 1
           +G+QYS ++I A +L  +K+
Sbjct: 161 NGQQYSPSQIGAFVLTKMKE 180


>ref|XP_002871379.1| mthsc70-2 [Arabidopsis lyrata subsp. lyrata]
           gi|297317216|gb|EFH47638.1| mthsc70-2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 683

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 7/129 (5%)
 Frame = -3

Query: 366 TKEGVSDHIGISFGTTSICVAVFGGST-KVIVNS------PSIVAYVREGEYVVGKEAQS 208
           +K   +D IGI  GTT+ CVAV  G   KVI N+      PS+VA+  +GE +VG  A+ 
Sbjct: 52  SKPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNSKGELLVGTPAKR 111

Query: 207 WAGIDPKNTISGIQHLLGRKFNDPLVQKEMEMVPYNIVKAPNGDAWVEAHGKQYSSTEIA 28
            A  +P NT+SG + L+GRKF+DP  QKEM+MVPY IV+APNGDAWVEA+G+QYS ++I 
Sbjct: 112 QAVTNPTNTVSGTKRLIGRKFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIG 171

Query: 27  AKLLANVKQ 1
           A +L  +K+
Sbjct: 172 AFILTKMKE 180


>ref|NP_196521.1| mitochondrial HSO70 2 [Arabidopsis thaliana]
           gi|75311081|sp|Q9LDZ0.1|HSP7J_ARATH RecName: Full=Heat
           shock 70 kDa protein 10, mitochondrial; AltName:
           Full=Heat shock protein 70-10; Short=AtHsp70-10;
           AltName: Full=Mitochondrial heat shock protein 70-2;
           Short=mtHsc70-2; Flags: Precursor
           gi|6746590|gb|AAF27638.1|AF217458_1 heat shock protein
           70 [Arabidopsis thaliana] gi|7671430|emb|CAB89371.1|
           heat shock protein 70 (Hsc70-5) [Arabidopsis thaliana]
           gi|209529803|gb|ACI49796.1| At5g09590 [Arabidopsis
           thaliana] gi|332004030|gb|AED91413.1| mitochondrial
           HSO70 2 [Arabidopsis thaliana]
          Length = 682

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 7/129 (5%)
 Frame = -3

Query: 366 TKEGVSDHIGISFGTTSICVAVFGGST-KVIVNS------PSIVAYVREGEYVVGKEAQS 208
           +K   +D IGI  GTT+ CVAV  G   KVI N+      PS+VA+  +GE +VG  A+ 
Sbjct: 52  SKPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNTKGELLVGTPAKR 111

Query: 207 WAGIDPKNTISGIQHLLGRKFNDPLVQKEMEMVPYNIVKAPNGDAWVEAHGKQYSSTEIA 28
            A  +P NT+SG + L+GRKF+DP  QKEM+MVPY IV+APNGDAWVEA+G+QYS ++I 
Sbjct: 112 QAVTNPTNTVSGTKRLIGRKFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIG 171

Query: 27  AKLLANVKQ 1
           A +L  +K+
Sbjct: 172 AFILTKMKE 180


>ref|XP_002313955.1| predicted protein [Populus trichocarpa] gi|222850363|gb|EEE87910.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/148 (47%), Positives = 97/148 (65%), Gaps = 7/148 (4%)
 Frame = -3

Query: 423 FMASLVGVMKSHSETSKPDTKEGVSDHIGISFGTTSICVAVFGG-STKVIVNS------P 265
           F  +L G+ ++ S       K   SD IGI  GTT+ CVAV  G S KVI N+      P
Sbjct: 39  FSQNLSGLSRAFS------AKPAGSDVIGIDLGTTNSCVAVMEGKSPKVIENAEGSRTTP 92

Query: 264 SIVAYVREGEYVVGKEAQSWAGIDPKNTISGIQHLLGRKFNDPLVQKEMEMVPYNIVKAP 85
           S+VA+  +GE ++G  A+  A  +P NT+ G + L+GRKF+DP  QKEM+MVPY IV+AP
Sbjct: 93  SVVAFTPKGELLMGTPAKRQAVTNPSNTVFGTKRLIGRKFDDPQTQKEMKMVPYKIVRAP 152

Query: 84  NGDAWVEAHGKQYSSTEIAAKLLANVKQ 1
           NGDAWVE++G+QYS ++I A +L  +K+
Sbjct: 153 NGDAWVESNGQQYSPSQIGAFILTKMKE 180


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