BLASTX nr result
ID: Coptis24_contig00022646
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022646 (978 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18867.3| unnamed protein product [Vitis vinifera] 74 5e-11 ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-11 ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|2... 71 5e-10 ref|XP_002527312.1| pentatricopeptide repeat-containing protein,... 65 2e-08 ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08 >emb|CBI18867.3| unnamed protein product [Vitis vinifera] Length = 804 Score = 73.9 bits (180), Expect = 5e-11 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = -3 Query: 724 TFKPDDFIHILNYCATSPDTWFFMETWRIMEEKEREMDTRCYRSIIQALTKGGYFPETF 548 + + DDFI+IL +C+ SPD F ME WRIM+EKE ++ RCY IQAL KGGY E F Sbjct: 89 SLRADDFIYILEHCSKSPDPLFVMEIWRIMDEKEVHVNNRCYMLSIQALCKGGYLEEAF 147 >ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like [Vitis vinifera] Length = 728 Score = 73.9 bits (180), Expect = 5e-11 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = -3 Query: 724 TFKPDDFIHILNYCATSPDTWFFMETWRIMEEKEREMDTRCYRSIIQALTKGGYFPETF 548 + + DDFI+IL +C+ SPD F ME WRIM+EKE ++ RCY IQAL KGGY E F Sbjct: 53 SLRADDFIYILEHCSKSPDPLFVMEIWRIMDEKEVHVNNRCYMLSIQALCKGGYLEEAF 111 >ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|222846523|gb|EEE84070.1| predicted protein [Populus trichocarpa] Length = 705 Score = 70.9 bits (172), Expect = 5e-10 Identities = 31/57 (54%), Positives = 41/57 (71%) Frame = -3 Query: 724 TFKPDDFIHILNYCATSPDTWFFMETWRIMEEKEREMDTRCYRSIIQALTKGGYFPE 554 + KP +F+ IL YCA SPD +ETW+IMEEKE +D++CY +I+AL KGGY E Sbjct: 27 SLKPHNFVPILQYCARSPDPLLVLETWQIMEEKEVGLDSKCYLLMIRALCKGGYLEE 83 >ref|XP_002527312.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223533312|gb|EEF35064.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 802 Score = 65.5 bits (158), Expect = 2e-08 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = -3 Query: 718 KPDDFIHILNYCATSPDTWFFMETWRIMEEKEREMDTRCYRSIIQALTKGGYFPETF 548 +P+DF+ IL YCA SPD F METWRIMEEKE + +++AL KGGY E + Sbjct: 91 RPNDFVDILRYCARSPDPLFAMETWRIMEEKEIGFNNISCLLMVRALCKGGYLEEAY 147 >ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like [Cucumis sativus] Length = 806 Score = 65.1 bits (157), Expect = 2e-08 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = -3 Query: 712 DDFIHILNYCATSPDTWFFMETWRIMEEKEREMDTRCYRSIIQALTKGGYFPETF 548 D+F+ IL+YCA SPD F METW+IMEE+ ++ C +I+AL KGGY E F Sbjct: 105 DNFVRILSYCAKSPDPLFVMETWKIMEERGIFLNNTCSLLMIEALCKGGYLDEAF 159