BLASTX nr result

ID: Coptis24_contig00022642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022642
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145923.1| PREDICTED: transcription factor TRY-like [Cu...   103   2e-20
ref|XP_002268795.1| PREDICTED: transcription factor TRY [Vitis v...   103   2e-20
ref|XP_002513586.1| triptychon and cpc, putative [Ricinus commun...   102   3e-20
ref|XP_002331819.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
gb|AFD29596.1| triptychon [Gossypium arboreum]                         99   4e-19

>ref|XP_004145923.1| PREDICTED: transcription factor TRY-like [Cucumis sativus]
           gi|449497314|ref|XP_004160369.1| PREDICTED:
           transcription factor TRY-like [Cucumis sativus]
           gi|357435283|gb|AET79925.1| R3 MYB transcription factor
           [Cucumis sativus]
          Length = 82

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = -1

Query: 257 MDN-RLQKRARIESNESQEVTSFEWEAINMTVQEEDLILRMHKLVGDWWTLIAGRIPDRK 81
           MDN R QK A+I   ES+EV+S  W+ I MT QEEDLI RMHKL+GD W LIAGRIP RK
Sbjct: 1   MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 80  PEEIERFWIMRQRKELSKRQKG 15
           PEEIER+WIM   +   KR++G
Sbjct: 61  PEEIERYWIMTHLEGFGKRRRG 82


>ref|XP_002268795.1| PREDICTED: transcription factor TRY [Vitis vinifera]
           gi|158323782|gb|ABW34395.1| Myb-related TRIPTYCHON-like
           protein [Vitis vinifera] gi|302143684|emb|CBI22545.3|
           unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/85 (60%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = -1

Query: 257 MDNRLQKRARIES-NESQEVTSFEWEAINMTVQEEDLILRMHKLVGDWWTLIAGRIPDRK 81
           MD R +K  +I + ++S+EV+S EWE INM+ QEEDLI RM++LVGD W LIAGRIP RK
Sbjct: 1   MDRRRRKLPKIAAPSQSEEVSSIEWEFINMSEQEEDLIYRMYRLVGDRWDLIAGRIPGRK 60

Query: 80  PEEIERFWIMRQRKELSKRQKGSAE 6
           PEEIERFWIMR R+  ++R K +++
Sbjct: 61  PEEIERFWIMRNRQGYAERGKEASQ 85


>ref|XP_002513586.1| triptychon and cpc, putative [Ricinus communis]
           gi|223547494|gb|EEF48989.1| triptychon and cpc, putative
           [Ricinus communis]
          Length = 75

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -1

Query: 257 MDNRLQKRARIESNESQEVTSFEWEAINMTVQEEDLILRMHKLVGDWWTLIAGRIPDRKP 78
           MD R +K+A+I   ES+EV+S EWE INM  QEEDLI RM++LVG+ W LIAGRIP RK 
Sbjct: 1   MDRRRRKQAKITIVESEEVSSIEWEYINMNQQEEDLIYRMYRLVGERWDLIAGRIPGRKA 60

Query: 77  EEIERFWIMRQRK 39
           EEIERFWIMR RK
Sbjct: 61  EEIERFWIMRHRK 73


>ref|XP_002331819.1| predicted protein [Populus trichocarpa] gi|222875057|gb|EEF12188.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -1

Query: 248 RLQKRARIESNESQEVTSFEWEAINMTVQEEDLILRMHKLVGDWWTLIAGRIPDRKPEEI 69
           R +K+ +I S+ES+EV+S EWE INM+ QEEDLI RMH+LVG+ W LIAGRIP RK EEI
Sbjct: 8   RRRKQPKINSSESEEVSSIEWEFINMSEQEEDLIYRMHRLVGERWDLIAGRIPGRKAEEI 67

Query: 68  ERFWIMRQRKELSKRQK 18
           ERFWIM+ R+  ++  K
Sbjct: 68  ERFWIMKHREGFAENGK 84


>gb|AFD29596.1| triptychon [Gossypium arboreum]
          Length = 89

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/80 (62%), Positives = 62/80 (77%)
 Frame = -1

Query: 257 MDNRLQKRARIESNESQEVTSFEWEAINMTVQEEDLILRMHKLVGDWWTLIAGRIPDRKP 78
           MD R +K+A+  S  S+EV+S EWE INM+ QEEDLI RM+KLVGD W LIAGRIP +K 
Sbjct: 1   MDKRDRKQAKTGSCCSEEVSSTEWEFINMSEQEEDLIYRMYKLVGDRWGLIAGRIPGQKA 60

Query: 77  EEIERFWIMRQRKELSKRQK 18
           EEIERFWIMR  +  +KR++
Sbjct: 61  EEIERFWIMRHGEVFAKRRR 80


Top