BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022636
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]    78   6e-13
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]    75   5e-12
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]    65   4e-09
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]    65   6e-09
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    59   3e-07

>emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]
          Length = 310

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
 Frame = +3

Query: 3   RIQNRKP---HYRERSRGRSKSRPRNEVSCYHCGKPGHYKSECRKLKKEQIKEKGG-HKH 170
           R +NRKP   + R++SRG+S SR   E+ C++ GKPGH K ECRK KKEQ K  G   K 
Sbjct: 32  RSKNRKPSSDYNRDKSRGKSNSR--KEIKCFYYGKPGHIKRECRKFKKEQFKGNGEVQKE 89

Query: 171 EKDVTAITSDGEDIILFSNCEDACLSV 251
           +KD+  + S+ + II+   C+DAC+++
Sbjct: 90  DKDIAVVASNADTIIV---CDDACVNL 113


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
 Frame = +3

Query: 3   RIQNRKP---HYRERSRGRSKSRPRNEVSCYHCGKPGHYKSECRKLKKEQIKEKG-GHKH 170
           R ++RKP   +  ++SRG+SKS+   ++ C +C KPGH K ECRK K+EQ K KG   K 
Sbjct: 73  RSKSRKPSSDYNCDKSRGKSKSQ--KDIKCLYCDKPGHIKRECRKFKREQFKRKGEEQKD 130

Query: 171 EKDVTAITSDGEDIILFSNCEDACLSV 251
           +KD+ A+ S+G+ I +   C+DAC+++
Sbjct: 131 DKDIAAVASNGDTINIV--CDDACVNL 155


>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
          Length = 761

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = +3

Query: 3   RIQNRKP---HYRERSRGRSKSRPRNEVSCYHCGKPGHYKSECRKLKKEQIKEK-GGHKH 170
           R + RKP   + R++SRG+SKS+   E+ C++ GK  H K +CRK ++EQ K K    K 
Sbjct: 32  RSKIRKPSSDYNRDKSRGKSKSK--KEIKCFYYGKSWHIKRKCRKFRREQFKGKCEEQKE 89

Query: 171 EKDVTAITSDGEDIILFSNCEDACLSV 251
           +KD+ A TSD + II+   C+DAC+++
Sbjct: 90  DKDIGATTSDVDMIIV---CDDACVNL 113


>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
          Length = 776

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = +3

Query: 3   RIQNRKP---HYRERSRGRSKSRPRNEVSCYHCGKPGHYKSECRKLKKEQIKEK-GGHKH 170
           R ++RKP   +  ++SRG+SKS    E+ C+H  K GH K +C+K+++EQ K K    K 
Sbjct: 286 RSKSRKPSNDYNCDKSRGKSKSL--KEIKCFHYDKLGHIKRKCKKIRREQFKGKCEEQKE 343

Query: 171 EKDVTAITSDGEDIILFSNCEDACLSV 251
           +KD+  + SDG+  I+   C+DAC+++
Sbjct: 344 DKDIVVVASDGDTTIV---CDDACVNL 367


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/72 (37%), Positives = 46/72 (63%)
 Frame = +3

Query: 30  RERSRGRSKSRPRNEVSCYHCGKPGHYKSECRKLKKEQIKEKGGHKHEKDVTAITSDGED 209
           R +S+ RSKSR RN   CY+C +PGH+K +C   +K +  E  G K++ +  A+  + ++
Sbjct: 218 RGKSKNRSKSRVRN---CYNCNQPGHFKRDCPNPRKGK-GETSGQKNDDNTAAMVQNNDN 273

Query: 210 IILFSNCEDACL 245
           ++LF N E+ C+
Sbjct: 274 VVLFINEEEECM 285