BLASTX nr result

ID: Coptis24_contig00022634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022634
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256...   149   4e-34
emb|CBI27218.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|XP_004134542.1| PREDICTED: uncharacterized protein LOC101206...   124   1e-26
ref|NP_172069.1| vacuolar ATPase assembly integral membrane prot...   122   7e-26
ref|XP_002326630.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256132 [Vitis vinifera]
          Length = 106

 Score =  149 bits (376), Expect = 4e-34
 Identities = 72/106 (67%), Positives = 84/106 (79%)
 Frame = -2

Query: 581 MAGVVRKFFVASMFMWIAPVAILYGFNHNVFPGXXXXXXXXXXXXSGFLAVISVNIVIAF 402
           MAGV++KFF+ASM MWIAP+AILYGFNHN+FPG            SGF+AVISVNIVIAF
Sbjct: 1   MAGVIKKFFIASMLMWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAF 60

Query: 401 YICMAMKEPSERHVPDPTFLAEAKASIRESTPAENDECSQDRDKQE 264
           YI MAMKEPS++H PDP FLA AKAS+ +STP E ++ SQ RDKQE
Sbjct: 61  YIFMAMKEPSDKHEPDPAFLAAAKASVSQSTPGETEDPSQSRDKQE 106


>emb|CBI27218.3| unnamed protein product [Vitis vinifera]
          Length = 92

 Score =  127 bits (319), Expect = 2e-27
 Identities = 62/92 (67%), Positives = 71/92 (77%)
 Frame = -2

Query: 539 MWIAPVAILYGFNHNVFPGXXXXXXXXXXXXSGFLAVISVNIVIAFYICMAMKEPSERHV 360
           MWIAP+AILYGFNHN+FPG            SGF+AVISVNIVIAFYI MAMKEPS++H 
Sbjct: 1   MWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAFYIFMAMKEPSDKHE 60

Query: 359 PDPTFLAEAKASIRESTPAENDECSQDRDKQE 264
           PDP FLA AKAS+ +STP E ++ SQ RDKQE
Sbjct: 61  PDPAFLAAAKASVSQSTPGETEDPSQSRDKQE 92


>ref|XP_004134542.1| PREDICTED: uncharacterized protein LOC101206493 [Cucumis sativus]
          Length = 106

 Score =  124 bits (312), Expect = 1e-26
 Identities = 64/106 (60%), Positives = 77/106 (72%)
 Frame = -2

Query: 581 MAGVVRKFFVASMFMWIAPVAILYGFNHNVFPGXXXXXXXXXXXXSGFLAVISVNIVIAF 402
           MA V+ KFF+AS+FMWI P+ +L+GFNHN  PG            SGFLAVISVN+VIA 
Sbjct: 1   MANVIMKFFIASLFMWITPITLLHGFNHNWIPGSTQLNPHSLTLLSGFLAVISVNVVIAI 60

Query: 401 YICMAMKEPSERHVPDPTFLAEAKASIRESTPAENDECSQDRDKQE 264
           YI MAMKEPS +H PDPTFLAEAKASI +ST  + D  SQ ++K+E
Sbjct: 61  YIIMAMKEPSSKHEPDPTFLAEAKASINQST-GKADGPSQAQNKKE 105


>ref|NP_172069.1| vacuolar ATPase assembly integral membrane protein VMA21-like
           domain-containing protein [Arabidopsis thaliana]
           gi|61742516|gb|AAX55079.1| hypothetical protein
           At1g05780 [Arabidopsis thaliana]
           gi|332189769|gb|AEE27890.1| vacuolar ATPase assembly
           integral membrane protein VMA21-like domain-containing
           protein [Arabidopsis thaliana]
          Length = 106

 Score =  122 bits (305), Expect = 7e-26
 Identities = 61/106 (57%), Positives = 70/106 (66%)
 Frame = -2

Query: 581 MAGVVRKFFVASMFMWIAPVAILYGFNHNVFPGXXXXXXXXXXXXSGFLAVISVNIVIAF 402
           MAGV+ KF +ASMFMWI PVAILYGFNHN+ PG            SGFLAV+SVN VI F
Sbjct: 1   MAGVMHKFLIASMFMWILPVAILYGFNHNLLPGSTTLSPHSLILLSGFLAVVSVNTVIVF 60

Query: 401 YICMAMKEPSERHVPDPTFLAEAKASIRESTPAENDECSQDRDKQE 264
           YICMAMKEP+++H PD  FLAEAK S+ + T            KQE
Sbjct: 61  YICMAMKEPADKHKPDAAFLAEAKDSVNKLTKGATSSDDHALKKQE 106


>ref|XP_002326630.1| predicted protein [Populus trichocarpa] gi|222833952|gb|EEE72429.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  120 bits (301), Expect = 2e-25
 Identities = 63/106 (59%), Positives = 75/106 (70%)
 Frame = -2

Query: 581 MAGVVRKFFVASMFMWIAPVAILYGFNHNVFPGXXXXXXXXXXXXSGFLAVISVNIVIAF 402
           MAGV+ KFFV SM MW+APVAILY FNH++ PG            SGF+AVISVNIVIAF
Sbjct: 1   MAGVIMKFFVTSMLMWMAPVAILYAFNHDLIPGITKLSPHSLTLMSGFVAVISVNIVIAF 60

Query: 401 YICMAMKEPSERHVPDPTFLAEAKASIRESTPAENDECSQDRDKQE 264
           YI MA+KEPS++H PDP FLAEA+AS+ +S     D  SQ   K+E
Sbjct: 61  YIYMAIKEPSDKHEPDPAFLAEAEASVSQSAGKVGDS-SQSVKKEE 105


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