BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022626
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]              108   2e-21
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   104   4e-20
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   101   4e-19
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    97   7e-18
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    96   2e-17

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  108 bits (270), Expect = 2e-21
 Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
 Frame = -3

Query: 502 GDIGDRISNLPEHILHYILSFLPTKYAVGTSVLATRWKYLWTSICNLDFCEGLSYITSEM 323
           G   DRISNLP+ +L +I+SFLPTK+AVGTSVL+ RW+YLW SI NLDF + L     + 
Sbjct: 6   GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKP 65

Query: 322 RDNKLRGKKIFIDFVERVLRLLDVSDIVKFSLTC--EELDAAHVADWISKAVRCNVQELI 149
             +  R    F +FV++VL    +S I KF L C   ELD+A V  WI  A+  NVQEL 
Sbjct: 66  IGDSER-SICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSA-VNSWICTALERNVQELD 123

Query: 148 LSITMEHPYIFPHCLFTFKSLRILKI 71
           L    E+P   P   F  K+L +LK+
Sbjct: 124 LYFDTEYPIELPPKFFFCKTLVVLKL 149


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  104 bits (260), Expect = 4e-20
 Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
 Frame = -3

Query: 529 QKVFEGQSSGDIGDR-ISNLPEHILHYILSFLPTKYAVGTSVLATRWKYLWTSICNLDFC 353
           +K  + +   D G++ I NLP+ +L +ILSFL T+ AV TS+L+ +W +LW S  NL F 
Sbjct: 12  RKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFF 71

Query: 352 EGLSYITSEMRDNKLRGKKIFIDFVERVLRLLDVSDIVKFSLTCE-ELDAAHVADWISKA 176
            GL          K   +K+F+DFV+RVL L   S+IV+F L+CE + D + V  WIS A
Sbjct: 72  -GL----------KSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAA 120

Query: 175 VRCNVQELILSI-TMEHPYIFPHCLFTFKSLRILKI 71
           V  NV++L L +   E  ++ PHCLF  ++L  L+I
Sbjct: 121 VNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEI 156


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  101 bits (251), Expect = 4e-19
 Identities = 61/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
 Frame = -3

Query: 493 GDRISNLPEHILHYILSFLPTKYAVGTSVLATRWKYLWTSICNLDFCEGLSYITSEMRDN 314
           G  I++LP+ +L +ILSFL TK AV TS+L+ +W++LW S+ NL+F +   Y  ++    
Sbjct: 37  GKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQ--CYFKAK---- 90

Query: 313 KLRGKKIFIDFVERVLRLLDVSDIVKFSLTCEELDAAHVADWISKAVRCNVQELILSI-- 140
               +KIF++ VERVL L D S+I KF+L+C   DA     W+S AV  NV+EL ++   
Sbjct: 91  ----RKIFMNSVERVLLLRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYE 146

Query: 139 -TMEHPYIFPHCLFTFKSLRILKIES 65
                 ++ P CLFT  +L  LKI S
Sbjct: 147 GGESESFVSPLCLFTCATLTKLKITS 172


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
 Frame = -3

Query: 538 SKMQKVFEGQSSGDIGDRISNLPEHILHYILSFLPTKYAVGTSVLATRWKYLWTSICNLD 359
           SK QK  +GQ      D ISNLP+HI+  +LSFLPTK AV TSVL+ RW YLWT I  LD
Sbjct: 17  SKRQKSNKGQ------DLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLD 70

Query: 358 FCEGLSYITSEMRDNKLRGKKIFIDFVERVLRLLDVSDIVKFSL-TCEELDAAHVADWIS 182
           F + + Y +S    N++R K  F+DFV+RVL  L+   I  FSL   E+ D++++  WIS
Sbjct: 71  F-DDIGYCSS----NEIR-KACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWIS 124

Query: 181 KAVRCNVQEL 152
             +   V++L
Sbjct: 125 IVINLRVRKL 134


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 64/161 (39%), Positives = 95/161 (59%)
 Frame = -3

Query: 490 DRISNLPEHILHYILSFLPTKYAVGTSVLATRWKYLWTSICNLDFCEGLSYITSEMRDNK 311
           D ISNLP+ +L +ILSFLPTK+AVGTS+L+ RW+YLW S+  LDF + L    S + + +
Sbjct: 10  DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 310 LRGKKIFIDFVERVLRLLDVSDIVKFSLTCEELDAAHVADWISKAVRCNVQELILSITME 131
            R   +F +FV+ VLR  +VS I KF L   + +   V  WI  A+   VQEL L + ++
Sbjct: 70  ER-IIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLLID 128

Query: 130 HPYIFPHCLFTFKSLRILKIESVTVFGKGTQRFAVNVPTSV 8
                P   F  K+L ++K+ S  +F        +++PT+V
Sbjct: 129 WRVELPPMFFICKTLVVVKL-SCALF--------LDIPTTV 160