BLASTX nr result

ID: Coptis24_contig00022620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022620
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578614.1| PREDICTED: LOW QUALITY PROTEIN: putative 1-a...   117   7e-25
gb|AFK35260.1| unknown [Medicago truncatula]                          116   2e-24
ref|XP_003631148.1| D-cysteine desulfhydrase [Medicago truncatul...   116   2e-24
ref|XP_003570540.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   115   5e-24
gb|AFK42354.1| unknown [Lotus japonicus]                              114   8e-24

>ref|XP_003578614.1| PREDICTED: LOW QUALITY PROTEIN: putative
           1-aminocyclopropane-1-carboxylate deaminase-like
           [Brachypodium distachyon]
          Length = 427

 Score =  117 bits (294), Expect = 7e-25
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = -3

Query: 216 EFVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQI 37
           +FVK+IAAATGIVLDPVYSGKAA+R+LKDM++NP  WEGRKVLF+HTGGLLGLY+K +Q+
Sbjct: 326 KFVKDIAAATGIVLDPVYSGKAAYRMLKDMSNNPTKWEGRKVLFVHTGGLLGLYDKVDQL 385

Query: 36  TPMMANWRRMDI 1
           +    +W+RMD+
Sbjct: 386 SSFFGSWQRMDL 397


>gb|AFK35260.1| unknown [Medicago truncatula]
          Length = 388

 Score =  116 bits (291), Expect = 2e-24
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -3

Query: 213 FVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQIT 34
           FVKE+A ATG+VLDPVYSGKAA+ +LKDMN+NP  WEGRK+LF+HTGGLLGLY+K +Q+ 
Sbjct: 304 FVKEVAEATGVVLDPVYSGKAAYAMLKDMNENPKKWEGRKILFVHTGGLLGLYDKVDQLG 363

Query: 33  PMMANWRRMDI 1
             + NW+RMD+
Sbjct: 364 SFVGNWQRMDV 374


>ref|XP_003631148.1| D-cysteine desulfhydrase [Medicago truncatula]
           gi|355525170|gb|AET05624.1| D-cysteine desulfhydrase
           [Medicago truncatula]
          Length = 388

 Score =  116 bits (291), Expect = 2e-24
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -3

Query: 213 FVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQIT 34
           FVKE+A ATG+VLDPVYSGKAA+ +LKDMN+NP  WEGRK+LF+HTGGLLGLY+K +Q+ 
Sbjct: 304 FVKEVAEATGVVLDPVYSGKAAYAMLKDMNENPKKWEGRKILFVHTGGLLGLYDKVDQLG 363

Query: 33  PMMANWRRMDI 1
             + NW+RMD+
Sbjct: 364 SFVGNWQRMDV 374


>ref|XP_003570540.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Brachypodium distachyon]
          Length = 419

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/72 (70%), Positives = 64/72 (88%)
 Frame = -3

Query: 216 EFVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQI 37
           +FVK+IAAATGIVLDPVYSGK A+ +LKDM+ NPA W+GRKVLFIHTGGLLGLY+K +Q+
Sbjct: 334 KFVKDIAAATGIVLDPVYSGKGAYGMLKDMSSNPAKWKGRKVLFIHTGGLLGLYDKVDQM 393

Query: 36  TPMMANWRRMDI 1
           + +  +WRRMD+
Sbjct: 394 SSLAGSWRRMDL 405


>gb|AFK42354.1| unknown [Lotus japonicus]
          Length = 381

 Score =  114 bits (285), Expect = 8e-24
 Identities = 48/72 (66%), Positives = 62/72 (86%)
 Frame = -3

Query: 216 EFVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQI 37
           +FVKE+A ATG+VLDPVYSGKAA+ +LKDMN+NP  WEGRK+LF HTGGLLGLY+K +Q+
Sbjct: 296 KFVKEVAEATGVVLDPVYSGKAAYAMLKDMNENPKKWEGRKILFKHTGGLLGLYDKVDQL 355

Query: 36  TPMMANWRRMDI 1
              + NW++MD+
Sbjct: 356 ASFVGNWQKMDV 367


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