BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022612
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519983.1| transcription factor, putative [Ricinus comm...   610   e-172
emb|CBI31126.3| unnamed protein product [Vitis vinifera]              601   e-170
ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vin...   601   e-170
ref|XP_002323112.1| GRAS family transcription factor [Populus tr...   595   e-168
ref|XP_003623699.1| Scarecrow [Medicago truncatula] gi|124360295...   593   e-167

>ref|XP_002519983.1| transcription factor, putative [Ricinus communis]
            gi|223540747|gb|EEF42307.1| transcription factor,
            putative [Ricinus communis]
          Length = 843

 Score =  610 bits (1573), Expect = e-172
 Identities = 300/329 (91%), Positives = 317/329 (96%), Gaps = 1/329 (0%)
 Frame = -3

Query: 985  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPI-HSQKMASAFQVFNGISPFVKF 809
            TP+GTSAQRVAAYFSEAMSARL++SCLGIYA LP+ P+ H+QKMASAFQVFNGISPFVKF
Sbjct: 485  TPYGTSAQRVAAYFSEAMSARLINSCLGIYATLPSMPLTHTQKMASAFQVFNGISPFVKF 544

Query: 808  SHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTNIEA 629
            SHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPP+VRLTGLGT+IEA
Sbjct: 545  SHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSIEA 604

Query: 628  LEATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLHHSLYDVTGSD 449
            LEATGKRLSDFA+ LGLPFEFFPVA+KVGNLDP+RLNVSKREAVAVHWL HSLYDVTGSD
Sbjct: 605  LEATGKRLSDFAQKLGLPFEFFPVADKVGNLDPDRLNVSKREAVAVHWLQHSLYDVTGSD 664

Query: 448  NNTLWLLQRLAPKVVTMVEQDLSQAGTFLGRFVEAIHYYSALFDSLGASYGEESEERHVV 269
            +NTLWLLQRLAPKVVT+VEQDLS AG+FLGRFVEAIHYYSALFDSLGASYGEESEERHVV
Sbjct: 665  SNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVV 724

Query: 268  EQQLLSREIRNVLAVGGPGRTGEVKFHNWREKLKHSGFRGISLGGNAATQANLLLGMFPC 89
            EQQLLSREIRNVLAVGGP R+GEVKFHNWREKL+ SGF+GISL GNAATQA LLLGMFP 
Sbjct: 725  EQQLLSREIRNVLAVGGPSRSGEVKFHNWREKLRQSGFKGISLAGNAATQATLLLGMFPS 784

Query: 88   DGYTLVEDNGALKLGWKDLCLLTASAWRP 2
            DGYTLVEDNG LKLGWKDLCLLTASAWRP
Sbjct: 785  DGYTLVEDNGTLKLGWKDLCLLTASAWRP 813


>emb|CBI31126.3| unnamed protein product [Vitis vinifera]
          Length = 664

 Score =  601 bits (1550), Expect = e-170
 Identities = 298/328 (90%), Positives = 311/328 (94%)
 Frame = -3

Query: 985  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPIHSQKMASAFQVFNGISPFVKFS 806
            TPFGTSAQRVAAYFSEAMSARLVSSCLGIYA LP  P HSQK+ SAFQVFNGISPFVKFS
Sbjct: 323  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPTVP-HSQKLVSAFQVFNGISPFVKFS 381

Query: 805  HFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTNIEAL 626
            HFTANQAIQEAFERE+RVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT++EAL
Sbjct: 382  HFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTSMEAL 441

Query: 625  EATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLHHSLYDVTGSDN 446
            EATGKRL+DFAE LGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWL HSLYDVTGSD 
Sbjct: 442  EATGKRLTDFAEKLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLQHSLYDVTGSDT 501

Query: 445  NTLWLLQRLAPKVVTMVEQDLSQAGTFLGRFVEAIHYYSALFDSLGASYGEESEERHVVE 266
            NTLWLLQRLAPKVVT+VEQDLS AG+FLGRFVEAIHYYSALFDSLGASYGEESE+RH VE
Sbjct: 502  NTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEQRHAVE 561

Query: 265  QQLLSREIRNVLAVGGPGRTGEVKFHNWREKLKHSGFRGISLGGNAATQANLLLGMFPCD 86
            QQLLSREIRNVLAVGGP R+G+VKF+NWREKL+ SGFR +SL GNAATQA LLLGMFP D
Sbjct: 562  QQLLSREIRNVLAVGGPSRSGDVKFNNWREKLQQSGFRVVSLAGNAATQATLLLGMFPSD 621

Query: 85   GYTLVEDNGALKLGWKDLCLLTASAWRP 2
            GYTLVEDNG LKLGWKDLCLLTASAWRP
Sbjct: 622  GYTLVEDNGTLKLGWKDLCLLTASAWRP 649


>ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vinifera]
          Length = 782

 Score =  601 bits (1550), Expect = e-170
 Identities = 298/328 (90%), Positives = 311/328 (94%)
 Frame = -3

Query: 985  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPIHSQKMASAFQVFNGISPFVKFS 806
            TPFGTSAQRVAAYFSEAMSARLVSSCLGIYA LP  P HSQK+ SAFQVFNGISPFVKFS
Sbjct: 441  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPTVP-HSQKLVSAFQVFNGISPFVKFS 499

Query: 805  HFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTNIEAL 626
            HFTANQAIQEAFERE+RVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT++EAL
Sbjct: 500  HFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTSMEAL 559

Query: 625  EATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLHHSLYDVTGSDN 446
            EATGKRL+DFAE LGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWL HSLYDVTGSD 
Sbjct: 560  EATGKRLTDFAEKLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLQHSLYDVTGSDT 619

Query: 445  NTLWLLQRLAPKVVTMVEQDLSQAGTFLGRFVEAIHYYSALFDSLGASYGEESEERHVVE 266
            NTLWLLQRLAPKVVT+VEQDLS AG+FLGRFVEAIHYYSALFDSLGASYGEESE+RH VE
Sbjct: 620  NTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEQRHAVE 679

Query: 265  QQLLSREIRNVLAVGGPGRTGEVKFHNWREKLKHSGFRGISLGGNAATQANLLLGMFPCD 86
            QQLLSREIRNVLAVGGP R+G+VKF+NWREKL+ SGFR +SL GNAATQA LLLGMFP D
Sbjct: 680  QQLLSREIRNVLAVGGPSRSGDVKFNNWREKLQQSGFRVVSLAGNAATQATLLLGMFPSD 739

Query: 85   GYTLVEDNGALKLGWKDLCLLTASAWRP 2
            GYTLVEDNG LKLGWKDLCLLTASAWRP
Sbjct: 740  GYTLVEDNGTLKLGWKDLCLLTASAWRP 767


>ref|XP_002323112.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222867742|gb|EEF04873.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 770

 Score =  595 bits (1535), Expect = e-168
 Identities = 296/329 (89%), Positives = 310/329 (94%), Gaps = 1/329 (0%)
 Frame = -3

Query: 985  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAP-IHSQKMASAFQVFNGISPFVKF 809
            TPFGTSAQRVAAYFSEAMSARLVSSCLGIYA LP+ P  H+QKMASAFQVFNGI PFVKF
Sbjct: 410  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPSMPQSHTQKMASAFQVFNGIGPFVKF 469

Query: 808  SHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTNIEA 629
            SHFTANQAIQEAFERE+RVHIIDLD+MQGLQWPGLFHILASRPGGPP+VRLTGLGT++EA
Sbjct: 470  SHFTANQAIQEAFEREERVHIIDLDVMQGLQWPGLFHILASRPGGPPYVRLTGLGTSLEA 529

Query: 628  LEATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLHHSLYDVTGSD 449
            LEATGKRLSDFA  LGLPFEF PVAEKVGNL+PERLNVSKREAVAVHWL HSLYDVTGSD
Sbjct: 530  LEATGKRLSDFAHKLGLPFEFIPVAEKVGNLEPERLNVSKREAVAVHWLQHSLYDVTGSD 589

Query: 448  NNTLWLLQRLAPKVVTMVEQDLSQAGTFLGRFVEAIHYYSALFDSLGASYGEESEERHVV 269
             N L LLQRLAPKVVT+VEQDLS AG+FLGRFVEAIHYYSALFDSLGASYGEESEERHVV
Sbjct: 590  TNMLCLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVV 649

Query: 268  EQQLLSREIRNVLAVGGPGRTGEVKFHNWREKLKHSGFRGISLGGNAATQANLLLGMFPC 89
            EQQLLSREIRNVLAVGGP R+G+VKFHNWREKL+ SGF+GISL GNAATQA LLLGMFP 
Sbjct: 650  EQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQQSGFKGISLAGNAATQATLLLGMFPS 709

Query: 88   DGYTLVEDNGALKLGWKDLCLLTASAWRP 2
            DGYTLVEDNG LKLGWKDLCLLTASAWRP
Sbjct: 710  DGYTLVEDNGTLKLGWKDLCLLTASAWRP 738


>ref|XP_003623699.1| Scarecrow [Medicago truncatula] gi|124360295|gb|ABN08308.1| Flagellar
            basal body rod protein; GRAS transcription factor
            [Medicago truncatula] gi|355498714|gb|AES79917.1|
            Scarecrow [Medicago truncatula]
          Length = 805

 Score =  593 bits (1530), Expect = e-167
 Identities = 291/328 (88%), Positives = 310/328 (94%)
 Frame = -3

Query: 985  TPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPIHSQKMASAFQVFNGISPFVKFS 806
            TPFGTSAQRVAAYFSEA+SARLVSSCLGIYA LP   +H+QK+ASAFQVFNGISPFVKFS
Sbjct: 466  TPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPPHTLHNQKVASAFQVFNGISPFVKFS 525

Query: 805  HFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTNIEAL 626
            HFTANQAIQEAF+RE+RVHIIDLDIMQGLQWPGLFHILASRPGGPP+VRLTGLGT++E L
Sbjct: 526  HFTANQAIQEAFDREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETL 585

Query: 625  EATGKRLSDFAETLGLPFEFFPVAEKVGNLDPERLNVSKREAVAVHWLHHSLYDVTGSDN 446
            EATGKRLSDFA  LGLPFEFFPVAEKVGN+D E+LNVSK EAVAVHWL HSLYDVTGSD 
Sbjct: 586  EATGKRLSDFASKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVHWLQHSLYDVTGSDT 645

Query: 445  NTLWLLQRLAPKVVTMVEQDLSQAGTFLGRFVEAIHYYSALFDSLGASYGEESEERHVVE 266
            NTLWLLQRLAPKVVT+VEQDLS AG+FLGRFVEAIHYYSALFDSLG+SYGEESEERHVVE
Sbjct: 646  NTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVE 705

Query: 265  QQLLSREIRNVLAVGGPGRTGEVKFHNWREKLKHSGFRGISLGGNAATQANLLLGMFPCD 86
            QQLLSREIRNVLAVGGP R+GE+KFHNWREKL+  GFRGISL GNAATQA+LLLGMFP +
Sbjct: 706  QQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSE 765

Query: 85   GYTLVEDNGALKLGWKDLCLLTASAWRP 2
            GYTLVEDNG LKLGWKDLCLLTASAWRP
Sbjct: 766  GYTLVEDNGILKLGWKDLCLLTASAWRP 793