BLASTX nr result
ID: Coptis24_contig00022610
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022610 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001042129.1| Os01g0168400 [Oryza sativa Japonica Group] g... 167 1e-39 gb|EAY72692.1| hypothetical protein OsI_00559 [Oryza sativa Indi... 167 1e-39 ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom... 166 2e-39 emb|CAN78074.1| hypothetical protein VITISV_038020 [Vitis vinifera] 165 4e-39 ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|2... 159 2e-37 >ref|NP_001042129.1| Os01g0168400 [Oryza sativa Japonica Group] gi|55297508|dbj|BAD68310.1| unknown protein [Oryza sativa Japonica Group] gi|113531660|dbj|BAF04043.1| Os01g0168400 [Oryza sativa Japonica Group] Length = 427 Score = 167 bits (422), Expect = 1e-39 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 10/133 (7%) Frame = -1 Query: 370 GGGGEVSIRIIGAGEHDN----------VRPPLVSPSSADESGATTADASSGDGDTTNRG 221 GGGGEVSIRI+G+GE V + A+ S + A A++G G+ Sbjct: 70 GGGGEVSIRIVGSGEAAGAASERGEEGVVEDEAGAAPQANPSTSAAAAATAGGGEAGRES 129 Query: 220 DSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTA 41 SSYQRYDIQQVARW+EQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFKSNDILRKQTA Sbjct: 130 SSSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTA 189 Query: 40 LKGERKMSVLAGI 2 LKGERKMSVL GI Sbjct: 190 LKGERKMSVLVGI 202 >gb|EAY72692.1| hypothetical protein OsI_00559 [Oryza sativa Indica Group] Length = 425 Score = 167 bits (422), Expect = 1e-39 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 10/133 (7%) Frame = -1 Query: 370 GGGGEVSIRIIGAGEHDN----------VRPPLVSPSSADESGATTADASSGDGDTTNRG 221 GGGGEVSIRI+G+GE V + A+ S + A A++G G+ Sbjct: 68 GGGGEVSIRIVGSGEAAGAASERGEEGVVEDEAGAAPQANPSTSAAAAATAGGGEAGRES 127 Query: 220 DSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTA 41 SSYQRYDIQQVARW+EQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFKSNDILRKQTA Sbjct: 128 SSSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTA 187 Query: 40 LKGERKMSVLAGI 2 LKGERKMSVL GI Sbjct: 188 LKGERKMSVLVGI 200 >ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Vitis vinifera] Length = 447 Score = 166 bits (419), Expect = 2e-39 Identities = 95/143 (66%), Positives = 103/143 (72%), Gaps = 24/143 (16%) Frame = -1 Query: 358 EVSIRIIGAGEH-------DNVRP--------PLVSPSSADESGA---------TTADAS 251 EVSIRIIGAGE DN R P VS +S +ESG+ +TAD Sbjct: 80 EVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVSDASRNESGSGVAAVNSGGSTADGE 139 Query: 250 SGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFK 71 +G + N DSSYQRYDIQQ ARWIEQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFK Sbjct: 140 PANGGSVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFK 199 Query: 70 SNDILRKQTALKGERKMSVLAGI 2 SNDILRKQTALKGERK+SVL GI Sbjct: 200 SNDILRKQTALKGERKLSVLTGI 222 >emb|CAN78074.1| hypothetical protein VITISV_038020 [Vitis vinifera] Length = 640 Score = 165 bits (417), Expect = 4e-39 Identities = 95/143 (66%), Positives = 102/143 (71%), Gaps = 24/143 (16%) Frame = -1 Query: 358 EVSIRIIGAGEH-------DNVRP--------PLVSPSSADESGA---------TTADAS 251 EVSIRIIGAGE DN R P VS S +ESG+ +TAD Sbjct: 80 EVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVSDXSRNESGSGVAAVNSGGSTADGE 139 Query: 250 SGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFK 71 +G + N DSSYQRYDIQQ ARWIEQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFK Sbjct: 140 PANGGSVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFK 199 Query: 70 SNDILRKQTALKGERKMSVLAGI 2 SNDILRKQTALKGERK+SVL GI Sbjct: 200 SNDILRKQTALKGERKLSVLTGI 222 >ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|222833620|gb|EEE72097.1| predicted protein [Populus trichocarpa] Length = 443 Score = 159 bits (402), Expect = 2e-37 Identities = 83/126 (65%), Positives = 95/126 (75%), Gaps = 6/126 (4%) Frame = -1 Query: 361 GEVSIRIIGAGEHDNVRPPLVS------PSSADESGATTADASSGDGDTTNRGDSSYQRY 200 GEV+IRIIG+GEH++ R +ES + D + DG N DS+YQRY Sbjct: 93 GEVAIRIIGSGEHEHDRDSSGGLVVGQVGGGQNESSSVGGDGEAADGAGGNGRDSTYQRY 152 Query: 199 DIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTALKGERKM 20 DIQQ ARWIEQ+LPFSLLLLVVFIRQHLQGFFVTIW+A VMFKSNDILRKQTALKGERK+ Sbjct: 153 DIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAVVMFKSNDILRKQTALKGERKV 212 Query: 19 SVLAGI 2 S+L GI Sbjct: 213 SMLVGI 218