BLASTX nr result

ID: Coptis24_contig00022601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022601
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259...   212   2e-52
emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera]   207   7e-51
ref|XP_002513429.1| conserved hypothetical protein [Ricinus comm...   204   4e-50
ref|XP_002307196.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-46
ref|XP_003545908.1| PREDICTED: uncharacterized protein LOC100784...   173   1e-40

>ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259352 [Vitis vinifera]
          Length = 418

 Score =  212 bits (539), Expect = 2e-52
 Identities = 163/410 (39%), Positives = 199/410 (48%), Gaps = 82/410 (20%)
 Frame = +2

Query: 107  MASACVNNTSLG--NFFDSP-----SHDWFNPRSS---------SKIDGAENKSSE---- 226
            MASACVNN  +   NF D P     ++ W +PR S         SK+ G ++ S      
Sbjct: 2    MASACVNNIGMSSENFLDCPPASYPTYGWLSPRISFSREFPDEESKMAGGKSPSPAEKPS 61

Query: 227  ----------------DFEFQLEDSVKMLPADELFSDGKLMPLLNIQTISNRLNVVSSSS 358
                            DFEF+LED V MLPADELFSDGKL+PL  +  I   +  + SS 
Sbjct: 62   DPVEVSDPDVSGKDVGDFEFRLEDPVAMLPADELFSDGKLVPL-QVSVIRPSVASIPSSE 120

Query: 359  YDEEHGLKSSISYEKSKILTGMGDPYLFSPKAPRCASGWRXXXXXXXXXXXXXXXXXXXX 538
                   KS    E S       DPYLFSPKAPRC+S W+                    
Sbjct: 121  IRSPETAKSRRRTEVS-----CTDPYLFSPKAPRCSSRWKELLGLKKLYQSSNPKQENHK 175

Query: 539  XXXX-------NQSLKHFRYRNPKS------DPSLGLPLLEETDSDRV------------ 643
                        +SLKHF +R+ KS      D SL LPLL ++DS+ V            
Sbjct: 176  TTSSLYSHSTNAKSLKHFLHRSSKSTSSSASDASLSLPLLRDSDSESVSMSSRLSLSSSS 235

Query: 644  ------ELPRVSLDSQKSHPSVKRQHN-----------HPPKVRLARRVQDXXXXXXXXX 772
                  +LPR+SLDS+K  PS     N           +PP+VR+ +             
Sbjct: 236  SGHEHEDLPRLSLDSEKPKPSANPNPNPSSNASTTTNPNPPRVRVVKARASSSDHPPAAR 295

Query: 773  XXXXXXXXXXXXXXXXMGVSMDSPRMNSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMER 952
                             G S+DSPRMNSSGK+VFQSLERSSSSPS+FNGGPR K++GME 
Sbjct: 296  VGRSPMRRAPDSSGR--GASVDSPRMNSSGKIVFQSLERSSSSPSSFNGGPRFKHRGME- 352

Query: 953  RSYSANVSVTPVLNLNVPVGSLRGSSK----FGLGQLFPSHKKGGGGGTS 1090
            RSYSANV +TPV  LNVPV SLRGSSK    FG GQLF S +K  G  ++
Sbjct: 353  RSYSANVRITPV--LNVPVCSLRGSSKSGGVFGFGQLFSSPQKREGSSSN 400


>emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera]
          Length = 389

 Score =  207 bits (526), Expect = 7e-51
 Identities = 154/382 (40%), Positives = 190/382 (49%), Gaps = 54/382 (14%)
 Frame = +2

Query: 107  MASACVNNTSLG--NFFDSP-----SHDWFNPRSS---------SKIDGAENKSSE---- 226
            MASACVNN  +   NF D P     ++ W +PR S         SK+ G ++ S      
Sbjct: 1    MASACVNNIGMSSENFLDCPPASYPTYGWLSPRISFSREFPDEESKMAGGKSPSPAEKPS 60

Query: 227  ----------------DFEFQLEDSVKMLPADELFSDGKLMPLLNIQTISNRLNVVSSSS 358
                            DFEF+LED V MLPADELFSDGKL+PL  +  I   +  + SS 
Sbjct: 61   DPVEVSDPDVSGKDVGDFEFRLEDPVAMLPADELFSDGKLVPL-QVSVIRPSVXSIPSSE 119

Query: 359  YDEEHGLKSSISYEKSKILTGMGDPYLFSPKAPRCASGWRXXXXXXXXXXXXXXXXXXXX 538
                   KS    E S       DPYLFSPKAPRC+S W+                    
Sbjct: 120  IRSPETAKSRRRTEVS-----CTDPYLFSPKAPRCSSRWKELLGLKKLYQSSNPKQENHK 174

Query: 539  XXXX-------NQSLKHFRYRNPKS------DPSLGLPLLEETDSDRVELPRVSLDSQKS 679
                        +SLKHF +R+ KS      D SL LPLL ++DS+   L    + +   
Sbjct: 175  TTSSLYSHSTNAKSLKHFLHRSSKSTSSSASDASLSLPLLRDSDSESXNLNZAQIPNPNP 234

Query: 680  HPSVKRQHN-HPPKVRLARRVQDXXXXXXXXXXXXXXXXXXXXXXXXXMGVSMDSPRMNS 856
              +     N +PP+VR+ +                              GVS+DSPRMNS
Sbjct: 235  SSNASTTTNPNPPRVRVVKARASSSDHPPAARVGRSPMRRAPDSSGR--GVSVDSPRMNS 292

Query: 857  SGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGSSK- 1033
            SGK+VFQSLERSSSSPS+FNGGPR K++GME RSYSANV +TPV  LNVPV SLRGSSK 
Sbjct: 293  SGKIVFQSLERSSSSPSSFNGGPRFKHRGME-RSYSANVRITPV--LNVPVCSLRGSSKS 349

Query: 1034 ---FGLGQLFPSHKKGGGGGTS 1090
               FG GQLF S +K  G  ++
Sbjct: 350  GGVFGFGQLFSSPQKREGSSSN 371


>ref|XP_002513429.1| conserved hypothetical protein [Ricinus communis]
            gi|223547337|gb|EEF48832.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 413

 Score =  204 bits (519), Expect = 4e-50
 Identities = 157/409 (38%), Positives = 198/409 (48%), Gaps = 75/409 (18%)
 Frame = +2

Query: 107  MASACVNNTSLG--NFFDS--PSHDWFNPR--------------SSSKIDGAENKSSE-- 226
            MASACVNN ++    F  +  PS+ W +PR               SSKID       +  
Sbjct: 1    MASACVNNITMSPDKFPPATYPSYGWLSPRISFSREEDTSSKQPGSSKIDPQAEDPLDPV 60

Query: 227  DFEFQLEDSVKMLPADELFSDGKLMPLLNIQTISNRLNVVSSSSYDEEHGLKSSISYEKS 406
            DFEF+L+D V MLPADELFSDGKL+PL  +  I   +N   S     E     S      
Sbjct: 61   DFEFRLDDPVTMLPADELFSDGKLVPL-QVNNIKAAVNSGLSEMRSPETTTAKSCRSRIM 119

Query: 407  KILTGMGDPYLFSPKAPRCASGWRXXXXXXXXXXXXXXXXXXXXXXXX---------NQS 559
            ++     DPYLFSPKAPRC+S W+                                  +S
Sbjct: 120  EMEISGTDPYLFSPKAPRCSSRWKELLGLKKLYQNANSSKAENHKTASLSSSNPNPNPKS 179

Query: 560  LKHFRYRNPKS---------DPSLGLPLLEETDSDRV-------------------ELPR 655
            LKHF +R+ KS         D SL LPLL+++D + V                   +LPR
Sbjct: 180  LKHFLHRSSKSCSCNSSSTSDHSLSLPLLKDSDCESVSISSSRLSLSSSSSGHDHEDLPR 239

Query: 656  VSLDSQKSHPSVKRQHN----------HPPKVRLARRVQDXXXXXXXXXXXXXXXXXXXX 805
            +SLDS+K +P+     N          +PP++R+ +   +                    
Sbjct: 240  LSLDSEKPNPNTNPNPNPFVLNRNPNQNPPRMRMVKPRSEINNANGNSSNNPAAGNRVGR 299

Query: 806  XXXXXM-------GVSMDSPRMNSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYS 964
                         GVS+DSPRMNSSGK+VFQSLERSSSSPS+FNGGPR K++GME RSYS
Sbjct: 300  SPMRRSAEDQSSRGVSVDSPRMNSSGKIVFQSLERSSSSPSSFNGGPRFKHRGME-RSYS 358

Query: 965  ANVSVTPVLNLNVPVGSLRGSSK-FGLGQLFPSHKKGGGGGTSADLSDK 1108
            ANV VTPV  LNVPV SLRG+SK FG GQLF S  +       A L  +
Sbjct: 359  ANVRVTPV--LNVPVCSLRGTSKSFGFGQLFSSSPQKRESSNKAQLQQQ 405


>ref|XP_002307196.1| predicted protein [Populus trichocarpa] gi|222856645|gb|EEE94192.1|
            predicted protein [Populus trichocarpa]
          Length = 474

 Score =  191 bits (484), Expect = 5e-46
 Identities = 154/433 (35%), Positives = 197/433 (45%), Gaps = 115/433 (26%)
 Frame = +2

Query: 107  MASACVNNTSLGNFFDSP----SHDWFNPRSS---------------------------- 190
            MASACVNN  +      P    S+ W +PR S                            
Sbjct: 1    MASACVNNMGMSPENFPPKTYQSYGWLSPRISFSREEDSNNTTTSKTTSAKSSSAAASSA 60

Query: 191  -------SKIDGAENKSSEDFEFQLEDSVKMLPADELFSDGKLMPL-LNIQTISNRLNVV 346
                    ++D  E K S DFEF+L++S  MLPADELFSDGKLMPL +N       L   
Sbjct: 61   PLPPPHPQQLDPPETKDSVDFEFRLDNSFTMLPADELFSDGKLMPLQINTGNAKPSLPPS 120

Query: 347  SSSSYDE--------EHGLKSSISYEKSKILTGMGDPYLFSPKAPRCASGWRXXXXXXXX 502
            +S+S +E        E G +   S  + ++     DPYLFSPKAPRC+S W+        
Sbjct: 121  TSTSVNELTEAVRLPEPGREPVKSCRRLEMEISGTDPYLFSPKAPRCSSRWKELLGLKKL 180

Query: 503  XXXXXXXXXXXXXXXX--------NQSLKHFRYRNPKS-----------------DPSLG 607
                                     +SLKH  +RN K+                 D SL 
Sbjct: 181  HQNPKPETQKPSTRTALFSSSSSNPKSLKHILHRNSKTCNCNTSSSSSSFSYTLLDNSLS 240

Query: 608  LPLLEETDSDRV-------------------ELPRVSLDSQKSHPSV------------- 691
            LPLL + D + +                   +LPR+SLDS K   ++             
Sbjct: 241  LPLLRDLDCESLSISSSRLSLSSSSSSHEHEDLPRLSLDSDKPSTNLNLMQNPVPNPFIL 300

Query: 692  -KRQHNHPPKVRLARRVQDXXXXXXXXXXXXXXXXXXXXXXXXXM-------GVSMDSPR 847
             + Q+ +PP++R+ + + +                                 GVS+DSPR
Sbjct: 301  NRNQNQNPPRMRMVKPLSENGNNNSGTSSTTRVGRSPMRRAAGESSEVSISSGVSVDSPR 360

Query: 848  MNSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGS 1027
            MNSSGK+VFQSLERSSSSPS+FNGGPR K++GME RSYSANV VTPV  LNVPV SLRGS
Sbjct: 361  MNSSGKIVFQSLERSSSSPSSFNGGPRFKHRGME-RSYSANVRVTPV--LNVPVCSLRGS 417

Query: 1028 SK--FGLGQLFPS 1060
            S+  FG GQLF S
Sbjct: 418  SRSGFGFGQLFSS 430


>ref|XP_003545908.1| PREDICTED: uncharacterized protein LOC100784462 [Glycine max]
          Length = 329

 Score =  173 bits (438), Expect = 1e-40
 Identities = 129/314 (41%), Positives = 157/314 (50%), Gaps = 36/314 (11%)
 Frame = +2

Query: 227  DFEFQLEDSVKMLPADELFSDGKLMPLLNIQTISNRLNVVSSSSYDEEHGLKSSISYEKS 406
            DFEF L+    MLPAD+LFSDGKL+PL  + +        SSS+ +      ++ +    
Sbjct: 12   DFEFPLDPPTTMLPADQLFSDGKLLPLHPLTSTITTSKSPSSSAVNATASAATTAT---- 67

Query: 407  KILTGMGDPYLFSPKAPRCASGWRXXXXXXXXXXXXXXXXXXXXXXXXNQSLKHFRYRNP 586
                   DP LFSPKAPRC+S W+                         +SLK+  +R  
Sbjct: 68   -----TADPCLFSPKAPRCSSRWKDLLGLKKFYQATNNAKAAPPSSA--KSLKNLLHRKT 120

Query: 587  KSDPSLG---LPLLEETDSDRV---------------------ELPRVSLDSQKSHPS-- 688
             S PSL     PLL    SD                       +LPR+SLDS+K +P+  
Sbjct: 121  TS-PSLSSENAPLLASNSSDAESLSITSSRLSLSSSSSGHDHDDLPRLSLDSEKPNPNPN 179

Query: 689  -VKRQHNHPPKVRLARRVQDXXXXXXXXXXXXXXXXXXXXXXXXX-----MGVSMDSPRM 850
             +    N  P++RL R   +                               GVS+DSPRM
Sbjct: 180  QISLHRNPNPRIRLVRNRTNSFDAHKPSSDQHYSRPGRSSIRRESETVTCRGVSVDSPRM 239

Query: 851  NSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGSS 1030
            NSSGK+VFQSLERSSSSPSTFNGGPR K++GME RSYSANV VTPV  LNVPV SLRGSS
Sbjct: 240  NSSGKIVFQSLERSSSSPSTFNGGPRFKHRGME-RSYSANVRVTPV--LNVPVCSLRGSS 296

Query: 1031 K----FGLGQLFPS 1060
            K    FG GQLF S
Sbjct: 297  KSGSVFGFGQLFSS 310


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