BLASTX nr result

ID: Coptis24_contig00022589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022589
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...   157   7e-37
emb|CBI23880.3| unnamed protein product [Vitis vinifera]              157   7e-37
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...   153   1e-35
emb|CAN60408.1| hypothetical protein VITISV_027505 [Vitis vinifera]   148   4e-34
ref|XP_003633590.1| PREDICTED: uncharacterized protein LOC100260...   146   2e-33

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score =  157 bits (398), Expect = 7e-37
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
 Frame = +1

Query: 16   DVMDVEGSHNTASNETMTEVSTLLRFAPGSIDDLEKFVSDFFQLLPSIMVICISLLGSDY 195
            ++++VEGSH+T  N    E   LLR AP S+  LE+FV  FF+ LP   VICISLLG   
Sbjct: 1599 NLLNVEGSHSTGPNCIRAETYNLLRLAPESLQGLEEFVMKFFEDLPCTTVICISLLGGAL 1658

Query: 196  ARLLSDVLPGHFSSPSCMLLSRLNSTNEPIVMLLPSAAIPEDI---DLDAKHITLYEGTN 366
            A LL ++L    S  + +LLSRLN  ++P+V+LLP  ++ E++   D  ++    YE  +
Sbjct: 1659 ASLLRELLNYPSSVNAWVLLSRLNMKSQPVVILLPVDSVLEEVSDDDASSESGIHYEHKD 1718

Query: 367  SSNNWICPWGRTVVDDVAPQFKLILQENYMSSSSFPTVDTQENRSLWWKWRMKLN 531
                W CPWG TVVDDV P FK IL+ENY+SSS+FP  DT+ENR  WW  R KL+
Sbjct: 1719 LDKQWHCPWGSTVVDDVTPAFKTILEENYLSSSTFPLDDTKENRLQWWTQRKKLD 1773


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score =  157 bits (398), Expect = 7e-37
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
 Frame = +1

Query: 16   DVMDVEGSHNTASNETMTEVSTLLRFAPGSIDDLEKFVSDFFQLLPSIMVICISLLGSDY 195
            ++++VEGSH+T  N    E   LLR AP S+  LE+FV  FF+ LP   VICISLLG   
Sbjct: 1546 NLLNVEGSHSTGPNCIRAETYNLLRLAPESLQGLEEFVMKFFEDLPCTTVICISLLGGAL 1605

Query: 196  ARLLSDVLPGHFSSPSCMLLSRLNSTNEPIVMLLPSAAIPEDI---DLDAKHITLYEGTN 366
            A LL ++L    S  + +LLSRLN  ++P+V+LLP  ++ E++   D  ++    YE  +
Sbjct: 1606 ASLLRELLNYPSSVNAWVLLSRLNMKSQPVVILLPVDSVLEEVSDDDASSESGIHYEHKD 1665

Query: 367  SSNNWICPWGRTVVDDVAPQFKLILQENYMSSSSFPTVDTQENRSLWWKWRMKLN 531
                W CPWG TVVDDV P FK IL+ENY+SSS+FP  DT+ENR  WW  R KL+
Sbjct: 1666 LDKQWHCPWGSTVVDDVTPAFKTILEENYLSSSTFPLDDTKENRLQWWTQRKKLD 1720


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score =  153 bits (387), Expect = 1e-35
 Identities = 86/173 (49%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
 Frame = +1

Query: 25   DVEGSHNTASNETMTEVSTLLRFAPGSIDDLEKFVSDFFQLLPSIMVICISLLGSDYARL 204
            D +GS  T +     E   L   AP S+ D+E FV+DFF  LPS MV+CISL+G  YA L
Sbjct: 1558 DDQGSQVTGATCKGAETCNLPSLAPKSLQDMEHFVTDFFSSLPSTMVVCISLIGDPYATL 1617

Query: 205  LSDVLPGHFSSPSCMLLSRLNSTNEPIVMLLPSAAIPEDI-DLDAKHITLYEGTNSSN-- 375
            L ++L       + MLLSRLNS + PI+MLLP   I E+  D DA +    E   S++  
Sbjct: 1618 LQELLMYPSRVCAWMLLSRLNSKSHPIMMLLPVDLISEETSDDDAPNPGSEEFPESNDLD 1677

Query: 376  -NWICPWGRTVVDDVAPQFKLILQENYMSSSSFPTVDTQENRSLWWKWRMKLN 531
             +W CPWG TV+D+V+P FKLIL+ENY+SSS FP  DT+ENR+LWW  R KL+
Sbjct: 1678 KHWHCPWGFTVIDEVSPAFKLILEENYLSSSIFPLEDTKENRTLWWMRRKKLD 1730


>emb|CAN60408.1| hypothetical protein VITISV_027505 [Vitis vinifera]
          Length = 879

 Score =  148 bits (374), Expect = 4e-34
 Identities = 80/172 (46%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
 Frame = +1

Query: 25  DVEGSHNTASNETMTEVSTLLRFAPGSIDDLEKFVSDFFQLLPSIMVICISLLGSDYARL 204
           ++ GSH+T  N    E   L R AP S+  L++FV  FF+ LP  +VICISLLG   A L
Sbjct: 286 EMMGSHSTGPNCIRAETYNLFRLAPESLQGLDEFVKKFFEDLPCTIVICISLLGGALASL 345

Query: 205 LSDVLPGHFSSPSCMLLSRLNSTNEPIVMLLPSAAIPEDI---DLDAKHITLYEGTNSSN 375
           L ++L    S  + +LLS LN  ++P+V+LLP  +I E++   D  ++    YE  +   
Sbjct: 346 LRELLNYPSSVNAWVLLSHLNMKSQPVVILLPVDSILEEVSDDDASSESRIHYEHKDLDK 405

Query: 376 NWICPWGRTVVDDVAPQFKLILQENYMSSSSFPTVDTQENRSLWWKWRMKLN 531
            W CPWG TVVDDVA  FK IL+ENY+SSS+FP  DT+ENR  WW  R KL+
Sbjct: 406 QWHCPWGSTVVDDVASAFKTILEENYLSSSTFPLDDTKENRLQWWTQRKKLD 457


>ref|XP_003633590.1| PREDICTED: uncharacterized protein LOC100260134 [Vitis vinifera]
          Length = 318

 Score =  146 bits (369), Expect = 2e-33
 Identities = 79/165 (47%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
 Frame = +1

Query: 28  VEGSHNTASNETMTEVSTLLRFAPGSIDDLEKFVSDFFQLLPSIMVICISLLGSDYARLL 207
           ++GSH+T  N    E   LLR AP S+  LE+FV  FF+ LP   VICISLLG   A LL
Sbjct: 2   LKGSHSTGPNCIRAETYNLLRLAPESLQGLEEFVMKFFEDLPCTTVICISLLGGALASLL 61

Query: 208 SDVLPGHFSSPSCMLLSRLNSTNEPIVMLLPSAAIPEDI---DLDAKHITLYEGTNSSNN 378
            ++L    S  + +LLS LN  ++P+V+LLP  ++ E++   D  ++    YE  +    
Sbjct: 62  RELLNYPSSVNAWVLLSHLNMKSQPVVILLPVDSVLEEVSDDDASSESGIHYEHKDLDKQ 121

Query: 379 WICPWGRTVVDDVAPQFKLILQENYMSSSSFPTVDTQENRSLWWK 513
           W CPWG TVVDDVAP FK+IL+ENY+SSS+FP  DT+ENR  W K
Sbjct: 122 WHCPWGSTVVDDVAPAFKMILEENYLSSSTFPLDDTKENRLQWCK 166


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