BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022587
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              115   8e-43
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-27
emb|CBI29241.3| unnamed protein product [Vitis vinifera]               79   7e-27
gb|ADE77588.1| unknown [Picea sitchensis]                              81   2e-26
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-26

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  115 bits (289), Expect(2) = 8e-43
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 205 ELLLSSPDPNFGVCILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTF 26
           E +++S DPN G CILLSNIYAS GRWKDVAR+RR VKEK  KKPSGCSW+EVDGVVH F
Sbjct: 522 ETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRF 581

Query: 25  LVEDTTHM 2
           +VEDTTH+
Sbjct: 582 VVEDTTHL 589



 Score = 83.2 bits (204), Expect(2) = 8e-43
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -2

Query: 411 CMVDLLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADK 265
           CMVDLLGRAG+L EA ELV+NM+I PDSIIWGALLSACRIH +++LADK
Sbjct: 471 CMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADK 519


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score = 79.3 bits (194), Expect(2) = 7e-27
 Identities = 35/67 (52%), Positives = 48/67 (71%)
 Frame = -1

Query: 205 ELLLSSPDPNFGVCILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTF 26
           E L+     + G  + LSNIYAS+G W+ VA++R ++KE D +K  GCSWIE+DGV+H F
Sbjct: 452 EHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEF 511

Query: 25  LVEDTTH 5
           LVED +H
Sbjct: 512 LVEDDSH 518



 Score = 66.2 bits (160), Expect(2) = 7e-27
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 411 CMVDLLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADK 265
           CMVDLLGRAG L E+ EL+ NM I PD +IW ALL AC++HG++++  +
Sbjct: 401 CMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKR 449


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 79.3 bits (194), Expect(2) = 7e-27
 Identities = 35/67 (52%), Positives = 48/67 (71%)
 Frame = -1

Query: 205 ELLLSSPDPNFGVCILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTF 26
           E L+     + G  + LSNIYAS+G W+ VA++R ++KE D +K  GCSWIE+DGV+H F
Sbjct: 335 EHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEF 394

Query: 25  LVEDTTH 5
           LVED +H
Sbjct: 395 LVEDDSH 401



 Score = 66.2 bits (160), Expect(2) = 7e-27
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 411 CMVDLLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADK 265
           CMVDLLGRAG L E+ EL+ NM I PD +IW ALL AC++HG++++  +
Sbjct: 284 CMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKR 332


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score = 80.9 bits (198), Expect(2) = 2e-26
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = -1

Query: 205 ELLLSSPDPNFGVCILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTF 26
           ELLL+    N G  +LLSNIYA+ GRW DVA++R+++KEKD KK  GCS IEV+  +H+F
Sbjct: 133 ELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSF 192

Query: 25  LVEDTTH 5
           +V D +H
Sbjct: 193 VVGDISH 199



 Score = 63.5 bits (153), Expect(2) = 2e-26
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -2

Query: 411 CMVDLLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADK 265
           CMVDLLGRAG+LNEA + ++ M I P + +WGA L +CRIH +I+L ++
Sbjct: 82  CMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGER 130


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score = 74.7 bits (182), Expect(2) = 6e-26
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -1

Query: 205 ELLLSSPDPNFGVCILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTF 26
           E LL     N G  +LLSN+YA +GRW DV R+R+L++++   K  GCSWIEV+  VH F
Sbjct: 579 EKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVF 638

Query: 25  LVEDTTH 5
           LV+D +H
Sbjct: 639 LVKDKSH 645



 Score = 67.8 bits (164), Expect(2) = 6e-26
 Identities = 27/46 (58%), Positives = 40/46 (86%)
 Frame = -2

Query: 411 CMVDLLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDL 274
           CMVDLLGRAG LNEA  L++ M + PD+++WG+LL+AC++HG+I++
Sbjct: 528 CMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEM 573