BLASTX nr result

ID: Coptis24_contig00022569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022569
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265...   139   3e-31
emb|CBI30727.3| unnamed protein product [Vitis vinifera]              125   4e-27
dbj|BAK00267.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   6e-22
dbj|BAJ98815.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   6e-22

>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291 ISAVAGDPGNDYLSAIGDPGMQRDDLRVAIESWNQCNEVGDETPGMGSPRAADCFDVYKS 112
           ++AV     N+Y+SAIGDPGM+RD LR+AIESWNQCNEVGDE P MGSPRAADCFDVYK 
Sbjct: 20  LNAVCYRAANEYISAIGDPGMRRDSLRLAIESWNQCNEVGDEVPNMGSPRAADCFDVYKG 79

Query: 111 STQG-GKDCSICKKFPHMVVHRVTEHDNKLGVGDPFLG 1
           S Q   K+CS C   P+M+VHRVTE DNKLGVGDPFLG
Sbjct: 80  SQQSEEKNCSFCSLLPYMLVHRVTERDNKLGVGDPFLG 117


>ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265127 [Vitis vinifera]
          Length = 514

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/94 (68%), Positives = 73/94 (77%), Gaps = 8/94 (8%)
 Frame = -1

Query: 258 YLSAIGDPGMQRDDLRVAIESWNQCNEVGDETPGMGSPRAADCFDVYKSST--------Q 103
           Y+S +GDPGM+RD LR+AIESWNQCNEVGDETP MGSPRAADCFDVYKS+          
Sbjct: 33  YVSGVGDPGMKRDGLRLAIESWNQCNEVGDETPNMGSPRAADCFDVYKSAQLLNSEPHHP 92

Query: 102 GGKDCSICKKFPHMVVHRVTEHDNKLGVGDPFLG 1
             K CS+C   P+++VHRVTE DNKLGVG PFLG
Sbjct: 93  SQKKCSVCNAIPYLLVHRVTEEDNKLGVGQPFLG 126


>emb|CBI30727.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
 Frame = -1

Query: 231 MQRDDLRVAIESWNQCNEVGDETPGMGSPRAADCFDVYKSS--TQGGKDCSICKKFPHMV 58
           M+RD LR+AIESWNQCNEVGDETP MGSPRAADCFDVYKS+      K CS+C   P+++
Sbjct: 1   MKRDGLRLAIESWNQCNEVGDETPNMGSPRAADCFDVYKSAQLLNTQKKCSVCNAIPYLL 60

Query: 57  VHRVTEHDNKLGVGDPFLG 1
           VHRVTE DNKLGVG PFLG
Sbjct: 61  VHRVTEEDNKLGVGQPFLG 79


>dbj|BAK00267.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 513

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/89 (58%), Positives = 62/89 (69%)
 Frame = -1

Query: 267 GNDYLSAIGDPGMQRDDLRVAIESWNQCNEVGDETPGMGSPRAADCFDVYKSSTQGGKDC 88
           G+ Y+SA+GDPGMQRD LRVA E+WN CNEVG E PGMGSPR ADCFD+  +  + G+  
Sbjct: 28  GHGYVSAVGDPGMQRDGLRVAWEAWNFCNEVGQEAPGMGSPRGADCFDIAATDDEQGQPV 87

Query: 87  SICKKFPHMVVHRVTEHDNKLGVGDPFLG 1
                  + VVHRVT+ DN L  GDPF G
Sbjct: 88  -------YKVVHRVTDADNALRAGDPFPG 109


>dbj|BAJ98815.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 513

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/89 (58%), Positives = 62/89 (69%)
 Frame = -1

Query: 267 GNDYLSAIGDPGMQRDDLRVAIESWNQCNEVGDETPGMGSPRAADCFDVYKSSTQGGKDC 88
           G+ Y+SA+GDPGMQRD LRVA E+WN CNEVG E PGMGSPR ADCFD+  +  + G+  
Sbjct: 28  GHGYVSAVGDPGMQRDGLRVAWEAWNFCNEVGQEAPGMGSPRGADCFDIAATDDEQGQPV 87

Query: 87  SICKKFPHMVVHRVTEHDNKLGVGDPFLG 1
                  + VVHRVT+ DN L  GDPF G
Sbjct: 88  -------YKVVHRVTDADNALRAGDPFPG 109


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