BLASTX nr result

ID: Coptis24_contig00022566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022566
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254...   122   2e-26
ref|XP_002514969.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
ref|XP_004159557.1| PREDICTED: uncharacterized protein LOC101224...   110   1e-22
ref|XP_004142947.1| PREDICTED: uncharacterized protein LOC101223...   110   1e-22
ref|XP_004142946.1| PREDICTED: uncharacterized protein LOC101223...   110   1e-22

>ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254469 isoform 1 [Vitis
           vinifera] gi|359473704|ref|XP_003631349.1| PREDICTED:
           uncharacterized protein LOC100254469 isoform 2 [Vitis
           vinifera]
          Length = 324

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/110 (60%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
 Frame = +3

Query: 12  RTCSTAASMVTSSLSPFVLCAPSSLIV-KCQLTHSNAPQKSEECFALRRDKLMTST---A 179
           RT ST  S + SS  P  + +PSSL++   Q+  SN PQ+SEE FALRRDKL TST   A
Sbjct: 44  RTFSTCTSPLNSSTPPLSIRSPSSLVLASSQIVPSNLPQRSEEWFALRRDKLTTSTFSTA 103

Query: 180 LGFWKGNRRNELWQEKVFAPHGDSIAVAAKAAMDWGVLNETAAIERYKSI 329
           LGFWKGNRR+ELW EKVFA    SI  +  +AM+WG+LNE AAIE+YKSI
Sbjct: 104 LGFWKGNRRHELWHEKVFASDVQSIEASRNSAMEWGMLNEAAAIEQYKSI 153


>ref|XP_002514969.1| conserved hypothetical protein [Ricinus communis]
           gi|223546020|gb|EEF47523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 310

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
 Frame = +3

Query: 9   VRTCSTAASMVTSSLSPFVLCAPSSLIVKCQLTHSNAPQKSEECFALRRDKLMTS---TA 179
           VRT ST A+ + S  +  ++  PSSL++    T SNAPQ+SEE FALRR+KL  S   TA
Sbjct: 31  VRTISTYAAELVSPTASLIVRPPSSLVLAACATQSNAPQRSEEWFALRREKLTASTFNTA 90

Query: 180 LGFWKGNRRNELWQEKVFAPHGDSIAVAAKAAMDWGVLNETAAIERYKSI 329
           LGFWKGNRR ELW EKVFA     I   +K AM+WGVLNE AA++ YKSI
Sbjct: 91  LGFWKGNRRPELWSEKVFASETQIIG-TSKRAMEWGVLNEAAAVDSYKSI 139


>ref|XP_004159557.1| PREDICTED: uncharacterized protein LOC101224925 isoform 1 [Cucumis
           sativus]
          Length = 379

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/109 (55%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
 Frame = +3

Query: 12  RTCSTAASMVTSSLSPFVLCAPSSLIVKCQLTHSNAPQKSEECFALRRDKLMTST---AL 182
           R  ST  S  +S+ +P V+  PS L++  Q   S APQ+SEE FALRRDKL TST   AL
Sbjct: 100 RPFSTCVSPSSSTKNPLVIWLPSPLVLASQANQSVAPQRSEEWFALRRDKLTTSTFSTAL 159

Query: 183 GFWKGNRRNELWQEKVFAPHGDSIAVAAKAAMDWGVLNETAAIERYKSI 329
           GFWKGNRR ELW EKVF           + AM+WGVLNE  AI+RYK I
Sbjct: 160 GFWKGNRRIELWHEKVFPSEIQKTEAPQQNAMEWGVLNEVNAIDRYKGI 208


>ref|XP_004142947.1| PREDICTED: uncharacterized protein LOC101223120 isoform 2 [Cucumis
           sativus] gi|449494483|ref|XP_004159558.1| PREDICTED:
           uncharacterized protein LOC101224925 isoform 2 [Cucumis
           sativus]
          Length = 313

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/109 (55%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
 Frame = +3

Query: 12  RTCSTAASMVTSSLSPFVLCAPSSLIVKCQLTHSNAPQKSEECFALRRDKLMTST---AL 182
           R  ST  S  +S+ +P V+  PS L++  Q   S APQ+SEE FALRRDKL TST   AL
Sbjct: 34  RPFSTCVSPSSSTKNPLVIWLPSPLVLASQANQSVAPQRSEEWFALRRDKLTTSTFSTAL 93

Query: 183 GFWKGNRRNELWQEKVFAPHGDSIAVAAKAAMDWGVLNETAAIERYKSI 329
           GFWKGNRR ELW EKVF           + AM+WGVLNE  AI+RYK I
Sbjct: 94  GFWKGNRRIELWHEKVFPSEIQKTEAPQQNAMEWGVLNEVNAIDRYKGI 142


>ref|XP_004142946.1| PREDICTED: uncharacterized protein LOC101223120 isoform 1 [Cucumis
           sativus]
          Length = 379

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/109 (55%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
 Frame = +3

Query: 12  RTCSTAASMVTSSLSPFVLCAPSSLIVKCQLTHSNAPQKSEECFALRRDKLMTST---AL 182
           R  ST  S  +S+ +P V+  PS L++  Q   S APQ+SEE FALRRDKL TST   AL
Sbjct: 100 RPFSTCVSPSSSTKNPLVIWLPSPLVLASQANQSVAPQRSEEWFALRRDKLTTSTFSTAL 159

Query: 183 GFWKGNRRNELWQEKVFAPHGDSIAVAAKAAMDWGVLNETAAIERYKSI 329
           GFWKGNRR ELW EKVF           + AM+WGVLNE  AI+RYK I
Sbjct: 160 GFWKGNRRIELWHEKVFPSEIQKTEAPQQNAMEWGVLNEVNAIDRYKGI 208


Top