BLASTX nr result
ID: Coptis24_contig00022550
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022550 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24131.3| unnamed protein product [Vitis vinifera] 325 7e-87 ref|XP_002265699.1| PREDICTED: general transcription factor 3C p... 325 7e-87 ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ... 265 8e-69 ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2... 263 2e-68 ref|XP_003607233.1| Transcription factor tau subunit sfc4 [Medic... 251 2e-64 >emb|CBI24131.3| unnamed protein product [Vitis vinifera] Length = 915 Score = 325 bits (833), Expect = 7e-87 Identities = 160/238 (67%), Positives = 191/238 (80%) Frame = +1 Query: 64 NKLSSEVNTKLGEANIFYAKGQYEEAINVLKEVVMLAPNLSETYHTLGLVYEEIGDEKKA 243 NKLS EV KLGEAN+ YA G+YEEAI VLKEVV LAPNL + YHT GLVY GD+K+A Sbjct: 87 NKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRA 146 Query: 244 MNFYMLAAHLAPKDHASLWKRLVALSIEQGNVGQATYCLSKAIKSDPEDIGLRFNRATLY 423 +NFYMLAAHL PKD +SLWK LV SIEQGN GQA YCLSKAI +DPEDI LRF+RA+LY Sbjct: 147 LNFYMLAAHLTPKD-SSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLY 205 Query: 424 VELGDHQKAAESYHHIVKLCPENVVAVKMAAKMYQKCNQVEQSISILEDYMKDHPEDTDF 603 VELG++QKAAESY I +L PENV A K AK+Y+KC QVE+S+SILEDY+KDHP D Sbjct: 206 VELGEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADL 265 Query: 604 TVVNLLVAIHMENNAHLKAIQQIEQARSIYCSQMQLPIDLTVKAGICQVHLGNIEEAE 777 ++V++L A+ MENN H +A+Q IE A+ +YCS LP+ LT+KAGIC +HLGNIE+AE Sbjct: 266 SIVDMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAE 323 >ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis vinifera] Length = 1110 Score = 325 bits (833), Expect = 7e-87 Identities = 160/238 (67%), Positives = 191/238 (80%) Frame = +1 Query: 64 NKLSSEVNTKLGEANIFYAKGQYEEAINVLKEVVMLAPNLSETYHTLGLVYEEIGDEKKA 243 NKLS EV KLGEAN+ YA G+YEEAI VLKEVV LAPNL + YHT GLVY GD+K+A Sbjct: 127 NKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRA 186 Query: 244 MNFYMLAAHLAPKDHASLWKRLVALSIEQGNVGQATYCLSKAIKSDPEDIGLRFNRATLY 423 +NFYMLAAHL PKD +SLWK LV SIEQGN GQA YCLSKAI +DPEDI LRF+RA+LY Sbjct: 187 LNFYMLAAHLTPKD-SSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLY 245 Query: 424 VELGDHQKAAESYHHIVKLCPENVVAVKMAAKMYQKCNQVEQSISILEDYMKDHPEDTDF 603 VELG++QKAAESY I +L PENV A K AK+Y+KC QVE+S+SILEDY+KDHP D Sbjct: 246 VELGEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADL 305 Query: 604 TVVNLLVAIHMENNAHLKAIQQIEQARSIYCSQMQLPIDLTVKAGICQVHLGNIEEAE 777 ++V++L A+ MENN H +A+Q IE A+ +YCS LP+ LT+KAGIC +HLGNIE+AE Sbjct: 306 SIVDMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAE 363 >ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis sativus] Length = 927 Score = 265 bits (677), Expect = 8e-69 Identities = 127/237 (53%), Positives = 183/237 (77%) Frame = +1 Query: 67 KLSSEVNTKLGEANIFYAKGQYEEAINVLKEVVMLAPNLSETYHTLGLVYEEIGDEKKAM 246 KL+ +V LG+A + YA+G++E+AI++L++VV+ AP+L ++YHTLGLVY IGD+ KAM Sbjct: 152 KLNRDVTKLLGDATLCYAQGEHEKAISLLRQVVLRAPDLPDSYHTLGLVYNAIGDDVKAM 211 Query: 247 NFYMLAAHLAPKDHASLWKRLVALSIEQGNVGQATYCLSKAIKSDPEDIGLRFNRATLYV 426 FYMLAAHL PKD +SLWK L + SI++G++ QA+YCLSKAIK++P+DI L F+RA+LY+ Sbjct: 212 GFYMLAAHLMPKD-SSLWKLLFSWSIDRGDIDQASYCLSKAIKAEPDDINLLFHRASLYL 270 Query: 427 ELGDHQKAAESYHHIVKLCPENVVAVKMAAKMYQKCNQVEQSISILEDYMKDHPEDTDFT 606 E GD +KAAE+Y I + C NV A+ AK+YQKC +E++I ILEDY+K HP + D Sbjct: 271 ERGDCEKAAETYDQIHQQCLGNVEALMTGAKLYQKCGHLERAICILEDYIKGHPSEADLD 330 Query: 607 VVNLLVAIHMENNAHLKAIQQIEQARSIYCSQMQLPIDLTVKAGICQVHLGNIEEAE 777 VV+LL +++M + KA+++IE A +YC+ +LP++LT KAGIC HLG++E+AE Sbjct: 331 VVDLLASLYMGSKEFSKALERIEHADRVYCAGNELPLNLTTKAGICHAHLGDLEKAE 387 >ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa] Length = 686 Score = 263 bits (673), Expect = 2e-68 Identities = 129/238 (54%), Positives = 174/238 (73%) Frame = +1 Query: 64 NKLSSEVNTKLGEANIFYAKGQYEEAINVLKEVVMLAPNLSETYHTLGLVYEEIGDEKKA 243 NKLS E+ LG+A + YA G YEEA+ VL EVV AP ++++YHTLGLV++ +G+ +KA Sbjct: 137 NKLSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNTEKA 196 Query: 244 MNFYMLAAHLAPKDHASLWKRLVALSIEQGNVGQATYCLSKAIKSDPEDIGLRFNRATLY 423 M FY +AA L PKD +SLWK L + +EQG++ +A CLSKAI +DP+DI LR A Y Sbjct: 197 MKFYRIAAFLRPKD-SSLWKLLFSWHVEQGDIARAWKCLSKAISADPDDISLRSLHALFY 255 Query: 424 VELGDHQKAAESYHHIVKLCPENVVAVKMAAKMYQKCNQVEQSISILEDYMKDHPEDTDF 603 ELGDHQ+AAESY IV++CPE+V A+K AAKM+ C Q+++ + ILEDY+K HP + D Sbjct: 256 DELGDHQRAAESYEQIVRICPEDVEAIKTAAKMHLNCGQIKRCVGILEDYLKGHPSEADL 315 Query: 604 TVVNLLVAIHMENNAHLKAIQQIEQARSIYCSQMQLPIDLTVKAGICQVHLGNIEEAE 777 +V+ LL + ME +AH A+Q IE A+ IY S +LP++L +KAGIC V LGNIE+AE Sbjct: 316 SVIILLADVFMEIDAHNNALQHIEHAQMIYYSGKELPLELMIKAGICHVFLGNIEKAE 373 >ref|XP_003607233.1| Transcription factor tau subunit sfc4 [Medicago truncatula] gi|355508288|gb|AES89430.1| Transcription factor tau subunit sfc4 [Medicago truncatula] Length = 958 Score = 251 bits (640), Expect = 2e-64 Identities = 128/237 (54%), Positives = 175/237 (73%) Frame = +1 Query: 67 KLSSEVNTKLGEANIFYAKGQYEEAINVLKEVVMLAPNLSETYHTLGLVYEEIGDEKKAM 246 KL +++ LG+A++ YA G+++ AI+VL EVV L PNL ++YHTLGLV+ IGD + M Sbjct: 162 KLDEKISQMLGDAHVHYANGRHKMAISVLHEVVRLEPNLPDSYHTLGLVHGAIGDHENEM 221 Query: 247 NFYMLAAHLAPKDHASLWKRLVALSIEQGNVGQATYCLSKAIKSDPEDIGLRFNRATLYV 426 FYM+ AHL PKD +LWK L SI Q ++GQA+YC+SKAIK+DP+D LR ++A LY Sbjct: 222 GFYMITAHLTPKD-PTLWKTLYVWSIGQDDIGQASYCISKAIKADPQDSSLRSHQAMLYA 280 Query: 427 ELGDHQKAAESYHHIVKLCPENVVAVKMAAKMYQKCNQVEQSISILEDYMKDHPEDTDFT 606 E ++QKAAE+Y + +LC ENV A+K AAK YQKC QVE+SI ILEDY+K+ P+ + + Sbjct: 281 ESQNYQKAAEAYEQVYQLCRENVDALKAAAKYYQKCGQVERSICILEDYLKNKPDGVNAS 340 Query: 607 VVNLLVAIHMENNAHLKAIQQIEQARSIYCSQMQLPIDLTVKAGICQVHLGNIEEAE 777 VV+LL AI ME AH +A+Q IEQ++ + +LP++L VKAGIC VHLGN+E A+ Sbjct: 341 VVDLLGAILMEIKAHDRALQYIEQSQVV---GKELPLNLKVKAGICHVHLGNLEMAQ 394