BLASTX nr result

ID: Coptis24_contig00022536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022536
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g0264...   121   5e-26
emb|CBI31681.3| unnamed protein product [Vitis vinifera]              121   5e-26
emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]   121   5e-26
ref|XP_002302981.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 551

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +1

Query: 58  SNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYWRQ 237
           S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH WR 
Sbjct: 7   SSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRP 66

Query: 238 ELYEMERYKLAAAKRSQKRHHNVKF 312
           ELYEMERYKLAAAKR QK   ++KF
Sbjct: 67  ELYEMERYKLAAAKRIQKNLQSLKF 91


>emb|CBI31681.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +1

Query: 58  SNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYWRQ 237
           S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH WR 
Sbjct: 7   SSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRP 66

Query: 238 ELYEMERYKLAAAKRSQKRHHNVKF 312
           ELYEMERYKLAAAKR QK   ++KF
Sbjct: 67  ELYEMERYKLAAAKRIQKNLQSLKF 91


>emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]
          Length = 551

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +1

Query: 58  SNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYWRQ 237
           S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH WR 
Sbjct: 7   SSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRP 66

Query: 238 ELYEMERYKLAAAKRSQKRHHNVKF 312
           ELYEMERYKLAAAKR QK   ++KF
Sbjct: 67  ELYEMERYKLAAAKRIQKHLQSLKF 91


>ref|XP_002302981.1| predicted protein [Populus trichocarpa] gi|222844707|gb|EEE82254.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/84 (69%), Positives = 66/84 (78%)
 Frame = +1

Query: 61  NFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYWRQE 240
           NFDE RW+I+IRRTL          PVCIFNV K LM+S P+ YVPQQ+AIGPYHYWR E
Sbjct: 15  NFDEHRWMINIRRTLDEELEDDTEIPVCIFNVLKILMTSCPDCYVPQQVAIGPYHYWRPE 74

Query: 241 LYEMERYKLAAAKRSQKRHHNVKF 312
           LYEMERYKLAAAKR+QKR  ++KF
Sbjct: 75  LYEMERYKLAAAKRAQKRLESLKF 98


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = +1

Query: 61  NFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYWRQE 240
           +FDE RW+I+IRRTL          PVCIFNVPK LM+S P+ Y PQ++AIGPYH+WR E
Sbjct: 15  SFDEHRWIINIRRTLEEELENDAEIPVCIFNVPKALMTSDPDSYTPQEVAIGPYHHWRPE 74

Query: 241 LYEMERYKLAAAKRSQKRHHNVKFQ 315
           LYEMERYKLAAAKR+QK+  ++KFQ
Sbjct: 75  LYEMERYKLAAAKRTQKKIQSLKFQ 99


Top