BLASTX nr result

ID: Coptis24_contig00022535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022535
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotr...   107   8e-22
ref|XP_002512340.1| conserved hypothetical protein [Ricinus comm...   104   9e-21
ref|XP_002328542.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_004156428.1| PREDICTED: protein FAM86A-like [Cucumis sati...    98   6e-19
ref|XP_004139364.1| PREDICTED: branched-chain-amino-acid aminotr...    98   6e-19

>ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotransferase-like protein
           2 [Vitis vinifera]
          Length = 960

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/156 (42%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   VIYDPLCFPHLVRVLSILLKPRKT--PLHQGNKGCVDLPTHEAFVDKRIDDDTLNFDCIT 176
           VIY+PLC PHL+RVL+ LL   ++  PL Q N  CV+        D R         CI 
Sbjct: 265 VIYNPLCLPHLIRVLATLLNQTRSSSPLQQDN--CVEFSP-----DSR---------CIM 308

Query: 177 TSSDKKSSKYNGDHNGDKFCACEGRSAMTPIGISKKKPMAYITTVIRNVDTYRYFLNVAS 356
            +  + +  +N DH        +G       G     P+AYI +VIRN++T+ YFL +A 
Sbjct: 309 DARAEGADIHNHDHGSRSTTNADG-------GGKNSVPVAYIASVIRNIETFNYFLALAE 361

Query: 357 QAYLSVVDITENQKPLNLLPYMQSYDRSNIRLLTVS 464
           +A L V D+TE  KP +LLPYMQSYDRS+IRL T+S
Sbjct: 362 EANLDVKDLTEQCKPFDLLPYMQSYDRSSIRLFTLS 397


>ref|XP_002512340.1| conserved hypothetical protein [Ricinus communis]
           gi|223548301|gb|EEF49792.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 411

 Score =  104 bits (259), Expect = 9e-21
 Identities = 61/154 (39%), Positives = 86/154 (55%)
 Frame = +3

Query: 3   VIYDPLCFPHLVRVLSILLKPRKTPLHQGNKGCVDLPTHEAFVDKRIDDDTLNFDCITTS 182
           +IYDP C P+LV+VL+ILLK  +       + C          D ++ D           
Sbjct: 271 IIYDPSCLPYLVQVLAILLKQTRAHSQMPEENCQGSLLDNNRADIKVKD----------- 319

Query: 183 SDKKSSKYNGDHNGDKFCACEGRSAMTPIGISKKKPMAYITTVIRNVDTYRYFLNVASQA 362
            D+ + K + +  G      +G S   P    +K P+AYI +VIRN+DT+  FL +A QA
Sbjct: 320 GDESNCKADKNGCGSDLRLVDGSSDAAP----RKGPVAYIASVIRNIDTFNCFLGLAEQA 375

Query: 363 YLSVVDITENQKPLNLLPYMQSYDRSNIRLLTVS 464
            LSV DITE ++P +LLPYMQSY+RS+IRL  V+
Sbjct: 376 NLSVRDITEKRRPFDLLPYMQSYNRSSIRLFCVA 409


>ref|XP_002328542.1| predicted protein [Populus trichocarpa] gi|222838257|gb|EEE76622.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  102 bits (253), Expect = 4e-20
 Identities = 65/160 (40%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   VIYDPLCFPHLVRVLSILLKPRKTPLHQGNKGCVDLPTHEAFVDKRIDDDTLNFDCITTS 182
           VIYDP C PHL+RVL ILLK +K       + C         +D            +  +
Sbjct: 251 VIYDPSCLPHLLRVLVILLKQKKAYTQTWEESCEGRLQDAEHID------------VNGA 298

Query: 183 SDKKSSKYNGDH-----NGDKF--CACEGRSAMTPIGISKKKPMAYITTVIRNVDTYRYF 341
           S+ KS   +  H     NG++   C  E     + +    K P+AYI +VIRN+DT+  F
Sbjct: 299 SEGKSLFAHDIHCVTIQNGNRTDPCHVEELHGGSSVARLMKCPVAYIASVIRNIDTFNCF 358

Query: 342 LNVASQAYLSVVDITENQKPLNLLPYMQSYDRSNIRLLTV 461
           L +A +A L + DITE   PLNLLPYMQSY+RS+IRL TV
Sbjct: 359 LKLAEEANLVIADITEALVPLNLLPYMQSYNRSSIRLFTV 398


>ref|XP_004156428.1| PREDICTED: protein FAM86A-like [Cucumis sativus]
          Length = 390

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 58/153 (37%), Positives = 82/153 (53%)
 Frame = +3

Query: 3   VIYDPLCFPHLVRVLSILLKPRKTPLHQGNKGCVDLPTHEAFVDKRIDDDTLNFDCITTS 182
           VIYDP+C P LVRVLSILL+P++          +   TH   V + +DD          +
Sbjct: 276 VIYDPICLPDLVRVLSILLRPKQ----------IGSSTHSFPVTEHVDDQ--------RN 317

Query: 183 SDKKSSKYNGDHNGDKFCACEGRSAMTPIGISKKKPMAYITTVIRNVDTYRYFLNVASQA 362
              +  K + DH                       P+AYI +VIRN+DT+  FL++  QA
Sbjct: 318 DGSRGFKTSRDH-----------------------PIAYIASVIRNIDTFNRFLSLVEQA 354

Query: 363 YLSVVDITENQKPLNLLPYMQSYDRSNIRLLTV 461
            LS+ D+T+  KP+NLLPYM +Y+RS+IRL T+
Sbjct: 355 NLSMCDVTDELKPMNLLPYMYTYNRSSIRLFTL 387


>ref|XP_004139364.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein
           2-like [Cucumis sativus]
          Length = 934

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 58/153 (37%), Positives = 82/153 (53%)
 Frame = +3

Query: 3   VIYDPLCFPHLVRVLSILLKPRKTPLHQGNKGCVDLPTHEAFVDKRIDDDTLNFDCITTS 182
           VIYDP+C P LVRVLSILL+P++          +   TH   V + +DD          +
Sbjct: 269 VIYDPICLPDLVRVLSILLRPKQ----------IGSSTHSFPVTEHVDDQ--------RN 310

Query: 183 SDKKSSKYNGDHNGDKFCACEGRSAMTPIGISKKKPMAYITTVIRNVDTYRYFLNVASQA 362
              +  K + DH                       P+AYI +VIRN+DT+  FL++  QA
Sbjct: 311 DGSRGFKTSRDH-----------------------PIAYIASVIRNIDTFNRFLSLVEQA 347

Query: 363 YLSVVDITENQKPLNLLPYMQSYDRSNIRLLTV 461
            LS+ D+T+  KP+NLLPYM +Y+RS+IRL T+
Sbjct: 348 NLSMCDVTDELKPMNLLPYMYTYNRSSIRLFTL 380


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