BLASTX nr result

ID: Coptis24_contig00022525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022525
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540565.1| PREDICTED: protein BEARSKIN1-like [Glycine max]    62   6e-08
ref|XP_002319872.1| NAC domain protein, IPR003441 [Populus trich...    59   5e-07
ref|NP_192773.1| protein BEARSKIN1 [Arabidopsis thaliana] gi|752...    57   1e-06
ref|XP_003533525.1| PREDICTED: protein BEARSKIN1-like [Glycine max]    57   2e-06
ref|XP_002874620.1| predicted protein [Arabidopsis lyrata subsp....    56   3e-06

>ref|XP_003540565.1| PREDICTED: protein BEARSKIN1-like [Glycine max]
          Length = 356

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/107 (37%), Positives = 49/107 (45%)
 Frame = +1

Query: 1   LEDTDDYQGNSGSEDGWVVCRVFKKKNLFKIXXXXXXXXXXXXXXXHXXXXXXXXXXXXX 180
           LED +D QG S +EDGWVVCRVFKKKNLFKI               H             
Sbjct: 137 LEDGNDPQG-SANEDGWVVCRVFKKKNLFKI--------VNEGGSTHNPDQQINNSSNTN 187

Query: 181 XXXTRDSHTQYANRVQHMNQHTFDLYKPELGLHYTTINHPDSSIHYS 321
               R++H     +    N    +L KPEL LHY  + +P  S+  S
Sbjct: 188 ARSYRENHYLLHQQQNPRNSSGLELDKPELALHYPHLQNPPYSLFQS 234


>ref|XP_002319872.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222858248|gb|EEE95795.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 337

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/110 (40%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   LEDTDDYQGNSGSEDGWVVCRVFKKKNLFKIXXXXXXXXXXXXXXXHXXXXXXXXXXXXX 180
           LED DD QGN+G EDGWVVCRVFKKKNLFK+                             
Sbjct: 136 LEDGDDAQGNAG-EDGWVVCRVFKKKNLFKV-----SNEGGTASMDSSDQQLHTSSNQSR 189

Query: 181 XXXTRDSHTQYANRVQH---MNQHTFDLYKPELGLHYTTINHPDSSIHYS 321
               RDS  QY  R  H     Q TF+  KPEL L++   +H ++   YS
Sbjct: 190 TSMYRDS--QYLIRQHHNHGSTQQTFEPNKPELALYH---HHMETPHQYS 234


>ref|NP_192773.1| protein BEARSKIN1 [Arabidopsis thaliana]
           gi|75266399|sp|Q9SV87.1|BRN2_ARATH RecName: Full=Protein
           BEARSKIN1; AltName: Full=NAC domain-containing protein
           70; Short=ANAC070 gi|4538964|emb|CAB39788.1| NAM/NAP
           like protein [Arabidopsis thaliana]
           gi|7267732|emb|CAB78158.1| NAM/NAP like protein
           [Arabidopsis thaliana] gi|22136592|gb|AAM91615.1|
           putative NAM/NAP [Arabidopsis thaliana]
           gi|332657470|gb|AEE82870.1| protein BEARSKIN1
           [Arabidopsis thaliana]
          Length = 341

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/107 (39%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   LEDTDDYQGNSGSEDGWVVCRVFKKKNLFKIXXXXXXXXXXXXXXXHXXXXXXXXXXXXX 180
           LED DD Q N  SEDGWVVCRVF KKNLFK+               H             
Sbjct: 137 LEDADDPQANP-SEDGWVVCRVFMKKNLFKVVNEGSSSINSLDQHNHDASNNNHALQARS 195

Query: 181 XXXTRDSHTQYANRVQHMNQHTFDLYKPELGLH-YTTINHPDSSIHY 318
               RDS  Q    V++    TF+L KP+L LH Y  I H   S+ +
Sbjct: 196 FMH-RDSPYQL---VRNHGAMTFELNKPDLALHQYPPIFHKPPSLGF 238


>ref|XP_003533525.1| PREDICTED: protein BEARSKIN1-like [Glycine max]
          Length = 359

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/94 (39%), Positives = 43/94 (45%)
 Frame = +1

Query: 1   LEDTDDYQGNSGSEDGWVVCRVFKKKNLFKIXXXXXXXXXXXXXXXHXXXXXXXXXXXXX 180
           LED +D QG S +EDGWVVCRVFKKKNLFKI               H             
Sbjct: 137 LEDGNDPQG-SANEDGWVVCRVFKKKNLFKI--------ENEGGSTHKPDHQINNSSNTN 187

Query: 181 XXXTRDSHTQYANRVQHMNQHTFDLYKPELGLHY 282
               R++H     +    N    +L KPEL LHY
Sbjct: 188 ARSYRENHYLLHQQQNPRNSSGLELDKPELALHY 221


>ref|XP_002874620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320457|gb|EFH50879.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/107 (39%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   LEDTDDYQGNSGSEDGWVVCRVFKKKNLFKIXXXXXXXXXXXXXXXHXXXXXXXXXXXXX 180
           LED DD Q N  SEDGWVVCRVF KKNLFK+               H             
Sbjct: 137 LEDPDDPQANP-SEDGWVVCRVFMKKNLFKVVNEGGTSINSSDQHNHDASNNNHTLQARS 195

Query: 181 XXXTRDSHTQYANRVQHMNQHTFDLYKPELGLH-YTTINHPDSSIHY 318
               RDS  Q    V++    TF+L KP+L LH Y  I H   S+ +
Sbjct: 196 FMH-RDSPYQL---VRNHGATTFELNKPDLTLHQYPPIFHKPPSLGF 238


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