BLASTX nr result

ID: Coptis24_contig00022506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022506
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23969.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002270216.2| PREDICTED: L-type lectin-domain containing r...   106   2e-21
emb|CAN78607.1| hypothetical protein VITISV_003876 [Vitis vinifera]   106   2e-21
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   106   2e-21
ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|22354...   103   2e-20

>emb|CBI23969.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/92 (55%), Positives = 65/92 (70%)
 Frame = +3

Query: 6    ALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGME 185
            ALDE L+++G  D +EVE+VL LGLLC YPDP  RP MRQV+K+L+G     ESEGE M+
Sbjct: 729  ALDERLRSRGELDEEEVEKVLHLGLLCTYPDPSARPTMRQVVKILEGRNEVCESEGEEMD 788

Query: 186  VGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIR 281
            V LLE M+S +MWS Y     + +HPT+E  R
Sbjct: 789  VYLLESMRSKSMWSKYPHTFGRGSHPTYEDFR 820



 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/92 (54%), Positives = 64/92 (69%)
 Frame = +3

Query: 6   ALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGME 185
           ALDE L+++G  D +EVE+VL LGLLC YPDP  RP MRQV+K+L+G     ESEGE M+
Sbjct: 531 ALDERLRSRGELDEEEVEKVLHLGLLCTYPDPSARPTMRQVVKILEGGNEVCESEGEEMD 590

Query: 186 VGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIR 281
             LLE ++S +MWS Y     + +HPTFE  R
Sbjct: 591 AYLLESVRSKSMWSKYSHTFGRGSHPTFEDFR 622


>ref|XP_002270216.2| PREDICTED: L-type lectin-domain containing receptor kinase VII.1
            [Vitis vinifera]
          Length = 947

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/111 (46%), Positives = 68/111 (61%)
 Frame = +3

Query: 6    ALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGME 185
            ALDE L+++G  D +EVE+VL LGLLC YPDP  RP MRQV+K+L+G     ESEGE M+
Sbjct: 837  ALDERLRSRGELDEEEVEKVLHLGLLCTYPDPSARPTMRQVVKILEGGNEVCESEGEEMD 896

Query: 186  VGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIRHXXXXXXXXXXXXXXMEGR 338
              LLE ++S +MWS Y     + +HPTFE  R               ++GR
Sbjct: 897  AYLLESVRSKSMWSKYSHTFGRGSHPTFEDFRQSLASSMSMSWSDAILDGR 947


>emb|CAN78607.1| hypothetical protein VITISV_003876 [Vitis vinifera]
          Length = 761

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/111 (46%), Positives = 68/111 (61%)
 Frame = +3

Query: 6   ALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGME 185
           ALDE L+++G  D +EVE+VL LGLLC YPDP  RP MRQV+K+L+G     ESEGE M+
Sbjct: 588 ALDERLRSRGELDEEEVEKVLHLGLLCTYPDPSARPTMRQVVKILEGGNEVCESEGEEMD 647

Query: 186 VGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIRHXXXXXXXXXXXXXXMEGR 338
             LLE ++S +MWS Y     + +HPTFE  R               ++GR
Sbjct: 648 AYLLESVRSKSMWSKYSHTFGRGSHPTFEDFRQSLASSMSMSWSDAILDGR 698


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/92 (55%), Positives = 64/92 (69%)
 Frame = +3

Query: 6   ALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGME 185
           ALDE L+++G  D +EVE+VL LGLLC YPDP  RP MRQV+K+L+G     ESEGE M+
Sbjct: 588 ALDERLRSRGELDEEEVEKVLHLGLLCTYPDPSARPTMRQVVKILEGRNEVCESEGEEMD 647

Query: 186 VGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIR 281
           V LLE M+S +MWS Y     + +HPT E  R
Sbjct: 648 VYLLESMRSKSMWSKYPHTFGRGSHPTXEDFR 679


>ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|223549367|gb|EEF50855.1|
           kinase, putative [Ricinus communis]
          Length = 728

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/93 (52%), Positives = 63/93 (67%)
 Frame = +3

Query: 3   NALDENLKAKGGFDSDEVERVLRLGLLCAYPDPRTRPMMRQVLKVLDGTPSTDESEGEGM 182
           +ALD  +KA+GGFD +EVERVL LGLLC YPD   RP MRQV+K+L+G    +E+E E M
Sbjct: 584 DALDPRIKARGGFDEEEVERVLHLGLLCGYPDASVRPTMRQVVKILEGKNEANETETEDM 643

Query: 183 EVGLLEKMKSSTMWSTYRRGSHQRAHPTFEQIR 281
           +  LL+ + S  MW  Y +     +HPTFE IR
Sbjct: 644 DAYLLQYVNSKEMWLDYSQRLGYSSHPTFEDIR 676


Top