BLASTX nr result

ID: Coptis24_contig00022491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022491
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316760.1| predicted protein [Populus trichocarpa] gi|2...   297   2e-78
ref|XP_003617690.1| Leucine-rich repeat receptor-like protein ki...   261   1e-67
emb|CAN75219.1| hypothetical protein VITISV_003520 [Vitis vinifera]   240   2e-61
ref|XP_002511434.1| serine-threonine protein kinase, plant-type,...   181   2e-43
ref|XP_001778286.1| predicted protein [Physcomitrella patens sub...   176   7e-42

>ref|XP_002316760.1| predicted protein [Populus trichocarpa] gi|222859825|gb|EEE97372.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  297 bits (761), Expect = 2e-78
 Identities = 156/267 (58%), Positives = 197/267 (73%)
 Frame = -2

Query: 803  RAAKLARDKEIQQSLDDSPIKISSVKPXXXXXXXXXXXELAFFDGEYERFKIEDLLASAA 624
            R +  A+++EI +SL  SP K     P           EL FF  E ERF ++DL  + A
Sbjct: 256  RFSDSAKEREILKSLAHSPQKTPPPVPQEDLKPKERCSELVFFVEEKERFGLDDLFEATA 315

Query: 623  DLQGQNLCSSLYKVRLKDNGIFAVKRLKNLHVSIEEFGRMMRQIGNLKHPNILSLVAYYS 444
            DLQ Q   SSLYKV+L  N ++AVKRLK L VS EEFG+ MRQIGNLKHPNIL LV Y S
Sbjct: 316  DLQSQTPSSSLYKVKL-GNIVYAVKRLKKLQVSFEEFGQTMRQIGNLKHPNILPLVGYNS 374

Query: 443  SKEEKLLVYRYQRKGSLLSLLENYAENKRDFTWRLRLSIAQGIAQGLKFLHDQSPVGKER 264
            + EEKLL+Y+YQ  GSLL+LLE+Y E KR+F W+ RLSIA GIA+GL F++ ++P+  E 
Sbjct: 375  TDEEKLLIYKYQSSGSLLNLLEDYIEGKREFPWKHRLSIAIGIARGLDFIY-RNPIEHEI 433

Query: 263  ITHGNLKLSNVLLTENEEPLIGEFGFQKYLDPKRACLFNSNGYKAPEKSLTEQADVFSFG 84
              HGN+KLSN+LL EN+EPLI E+GF  +LDPKR   F+SNGY APEK L+EQ DVFSFG
Sbjct: 434  KPHGNIKLSNILLDENQEPLISEYGFSTFLDPKRVWSFSSNGYTAPEKILSEQGDVFSFG 493

Query: 83   VILLELLTGKTIERTGLDLPKWVKAMV 3
            +I+LELLTGKT+E++G+DLPKWV+++V
Sbjct: 494  IIMLELLTGKTVEKSGIDLPKWVRSIV 520


>ref|XP_003617690.1| Leucine-rich repeat receptor-like protein kinase [Medicago
            truncatula] gi|355519025|gb|AET00649.1| Leucine-rich
            repeat receptor-like protein kinase [Medicago truncatula]
          Length = 575

 Score =  261 bits (667), Expect = 1e-67
 Identities = 135/268 (50%), Positives = 192/268 (71%), Gaps = 1/268 (0%)
 Frame = -2

Query: 803  RAAKLARDKEIQQSLDDSPIKISSVKPXXXXXXXXXXXELAFFDGEYERFKIEDLLASAA 624
            +++KL  + E++++  DSP+K  +              EL FF  ++ERFK+EDLL + A
Sbjct: 214  KSSKLMGEIEVKKNNLDSPMK-KATSEGRLKGGDNNNSELVFFVEDHERFKLEDLLRATA 272

Query: 623  DLQGQNLCSSLYKVRLKDNGIFAVKRLKNLHVSIEEFGRMMRQIGNLKHPNILSLVAYYS 444
            DL+ +N  SSL+KV+ ++N  +AVKRLKNL VS +EF  +++QI  +KH NILSLV Y S
Sbjct: 273  DLRSENFWSSLFKVKFENNVEYAVKRLKNLQVSCDEFREILKQISKVKHQNILSLVGYRS 332

Query: 443  SKEEKLLVYRYQRKGSLLSLLENYAENKRDFTWRLRLSIAQGIAQGLKFLHDQSPVGK-E 267
            +KEEKL++Y+YQ  GS+L+LL +Y   ++DF W+LRL+IA GIA+GL F++ +   G+  
Sbjct: 333  TKEEKLIIYKYQSNGSVLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLEEGEVN 392

Query: 266  RITHGNLKLSNVLLTENEEPLIGEFGFQKYLDPKRACLFNSNGYKAPEKSLTEQADVFSF 87
             I HGNLKLSN+LL +  E LI E G  K+ +P R   F+S+GY APEKSLTE+ DV+SF
Sbjct: 393  SIPHGNLKLSNILLDDKNEALISEHGLSKFFEPDRGTFFSSHGYTAPEKSLTEKGDVYSF 452

Query: 86   GVILLELLTGKTIERTGLDLPKWVKAMV 3
            GVILLELLTG++IE + +DL +WV++MV
Sbjct: 453  GVILLELLTGQSIEVSRIDLVRWVRSMV 480


>emb|CAN75219.1| hypothetical protein VITISV_003520 [Vitis vinifera]
          Length = 506

 Score =  240 bits (613), Expect = 2e-61
 Identities = 134/267 (50%), Positives = 166/267 (62%)
 Frame = -2

Query: 803 RAAKLARDKEIQQSLDDSPIKISSVKPXXXXXXXXXXXELAFFDGEYERFKIEDLLASAA 624
           +A + A++KEI +SL  SP+K    K            EL FF GE+ RF++EDLL SAA
Sbjct: 198 KAVRSAKEKEILKSLGASPLKSPRTKTTDEVKPEKACSELVFFVGEHARFRLEDLLESAA 257

Query: 623 DLQGQNLCSSLYKVRLKDNGIFAVKRLKNLHVSIEEFGRMMRQIGNLKHPNILSLVAYYS 444
           DLQ Q+LCSSLY                                                
Sbjct: 258 DLQSQSLCSSLY------------------------------------------------ 269

Query: 443 SKEEKLLVYRYQRKGSLLSLLENYAENKRDFTWRLRLSIAQGIAQGLKFLHDQSPVGKER 264
            KEEKLL+Y YQR GSL +LLENY E +R+F WR RLSIA GIA+GL F+H ++    E 
Sbjct: 270 -KEEKLLIYNYQRNGSLQTLLENYIEGQREFPWRHRLSIACGIARGLDFIHQKTDHW-ES 327

Query: 263 ITHGNLKLSNVLLTENEEPLIGEFGFQKYLDPKRACLFNSNGYKAPEKSLTEQADVFSFG 84
           I HG +KLSN+LL ENEEPLI E+G+ K+LDPK A L++SNGY APE+ L+E+ DVFSFG
Sbjct: 328 IPHGGIKLSNILLNENEEPLISEYGYSKFLDPKTASLYSSNGYTAPERRLSEEGDVFSFG 387

Query: 83  VILLELLTGKTIERTGLDLPKWVKAMV 3
           VILLELLTGKT+E++ LDLPKWVK+MV
Sbjct: 388 VILLELLTGKTVEKSALDLPKWVKSMV 414


>ref|XP_002511434.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223550549|gb|EEF52036.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 592

 Score =  181 bits (458), Expect = 2e-43
 Identities = 103/224 (45%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
 Frame = -2

Query: 662 ERFKIEDLLASAADLQGQNLCSSLYKVRLKDNGIFAVKRLKNLHVSIEEFGRMMRQIGNL 483
           +  K EDLL + A+L G+    SLYKV L D  I  VKR+K L +S E+F + +++I  +
Sbjct: 306 KELKFEDLLRAPAELLGKGKHGSLYKVLLNDEIILIVKRIKYLGISSEDFKKRIQRIQQV 365

Query: 482 KHPNILSLVAYYSSKEEKLLVYRYQRKGSLLSLLENYAENKRDFTWRLRLSIAQGIAQGL 303
           KHP  LS VA+Y SKEEKLLVY +Q+ GSL  LL   ++N + F W  RL++A  IA+ L
Sbjct: 366 KHPRFLSPVAFYCSKEEKLLVYEFQQNGSLFKLLHG-SQNGQVFDWGSRLNVATIIAETL 424

Query: 302 KFLHDQSPVGKERITHGNLKLSNVLLTENEEPLIGEFGFQKYLDPKRACLFNSNGYK--A 129
            F+H +    ++ I HGNLK +N+L  EN EP I E+G     +  ++ L  ++ YK  A
Sbjct: 425 AFIHQE--FWEDGIAHGNLKSTNILFNENMEPCISEYGLMVVENQDQSLLSKTDSYKQNA 482

Query: 128 PEKSL--TEQADVFSFGVILLELLTGKTIERTGLDLPKWVKAMV 3
           P   L  T + DV++FGVILLELLTGK +E  G DL KWV ++V
Sbjct: 483 PSSRLYSTFKVDVYAFGVILLELLTGKLVENNGFDLAKWVHSVV 526


>ref|XP_001778286.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162670383|gb|EDQ56953.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 662

 Score =  176 bits (445), Expect = 7e-42
 Identities = 101/238 (42%), Positives = 147/238 (61%), Gaps = 10/238 (4%)
 Frame = -2

Query: 686  LAFFDGEYERFKIEDLLASAADLQGQNLCSSLYKVRLKDNGIFAVKRLKNLHVSIEEFGR 507
            L FF+G+   F +EDLL ++A++ G+    + YK  L++  I AVKRLK++ +S ++F  
Sbjct: 316  LVFFEGKRFSFDLEDLLRASAEVLGKGSAGTAYKAVLEEGTILAVKRLKDVSISRKDFEA 375

Query: 506  MMRQIGNLKHPNILSLVAYYSSKEEKLLVYRYQRKGSLLSLLE-NYAENKRDFTWRLRLS 330
             +  +G L+H N++ L AYY SK+EKLLVY Y   GSL +LL  N   ++    W  R+ 
Sbjct: 376  QIEVVGKLQHRNLVPLRAYYFSKDEKLLVYDYMSMGSLSALLHGNRGSSRTPLDWVTRVR 435

Query: 329  IAQGIAQGLKFLHDQSPVGKERITHGNLKLSNVLLTENEEPLIGEFGFQKYLDPKRACLF 150
            IA G A+GL +LH Q   G  R  HGN+K SN+LL  + E  I +FG  + L    A   
Sbjct: 436  IALGAARGLAYLHAQ---GGSRFVHGNIKSSNILLNRDLEACISDFGLAQLLSSTSAS-S 491

Query: 149  NSNGYKAPE----KSLTEQADVFSFGVILLELLTGK-----TIERTGLDLPKWVKAMV 3
               GY+APE    + +T+Q+DV+SFGV+LLELLTGK     ++   G+DLP WV+++V
Sbjct: 492  RIIGYRAPEISETRKVTQQSDVYSFGVLLLELLTGKAPAQVSMNEEGIDLPGWVQSVV 549


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