BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022485
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin...    62   4e-08
ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containin...    60   2e-07
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...    59   5e-07

>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
 Frame = +1

Query: 1   GQSELQKFGGHNEIEMGKVGV----APPKPLPSPANDASLDNTVAVASKKQVLEKFFSKW 168
           G +ELQ  GG  E+E G  G     APP  LP+  + +   N  ++  ++Q  +K   KW
Sbjct: 254 GLAELQAPGGRTEVEAGNAGSVLTKAPPPLLPNNVSPSMTVNVPSLIEEEQG-KKCLLKW 312

Query: 169 KGPEKISRIYADWIDDIPLVNQSPSKTEN 255
           KG +KI+RIYADW+DD+PLV+   ++ ++
Sbjct: 313 KGQKKINRIYADWLDDLPLVHNLTNQVQS 341


>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1   GQSELQKFGGHNEIEMGKVGVAPPKPLPSPANDASLDNTVAVAS--KKQVLEKFFSKWKG 174
           GQ+ELQ   G  E E+G  G    KP P    + S   T +V S  +++  +K F KWKG
Sbjct: 255 GQAELQIPNGRAEGEVGNAGSILTKPPPILVTNGSPSMTASVPSLVEERQGKKCFLKWKG 314

Query: 175 PEKISRIYADWIDDIPLVNQSPSKTEN 255
            +KI+RIY DW+DD+PLV+   ++ E+
Sbjct: 315 FKKINRIYGDWLDDLPLVHNLTNQVES 341


>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 347

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
 Frame = +1

Query: 1   GQSELQKFGGHNEIEMGKVGVAP----------PKPLPSPANDASLDNTVAV--ASKKQV 144
           GQ+ELQ  GG  E E    GV P          P+     +NDA   +  +V  A++K+ 
Sbjct: 253 GQAELQVPGGRTEAETA--GVNPISTKATIPTLPRATSVSSNDAPPSHRASVPPANEKER 310

Query: 145 LEKFFSKWKGPEKISRIYADWIDDIPLVNQSPSK 246
            +K+  KWKG +KI+RIY DW+DD+PLV+  P +
Sbjct: 311 DKKYLLKWKGHKKINRIYGDWLDDLPLVHNLPGR 344


>ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 345

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
 Frame = +1

Query: 1   GQSELQKFGGHNEIEM-GKVGVAPPKPLPS-------PANDASLDNTVAV--ASKKQVLE 150
           GQ+ELQ  GG  E E+ G + ++    +P+        +NDA   +  +V  A+++   E
Sbjct: 253 GQAELQVPGGRTEAEIPGAIPISTKATIPTLPRATSVSSNDAPPSHRASVLPANEEDQDE 312

Query: 151 KFFSKWKGPEKISRIYADWIDDIPLVNQSP 240
           K   KWKG  KI+RIY DW+DD+PLV+  P
Sbjct: 313 KCLLKWKGHRKINRIYGDWLDDLPLVHDLP 342


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   GQSELQKF-GGHNEIEMGKVGVAPPKPLPSPANDASLDNTVAVASKKQVLEK-FFSKWKG 174
           GQSELQ + G   E+    + V P   +   A+ +   N V  ++  +  EK    KWKG
Sbjct: 262 GQSELQLYIGREGEVSTAALNVKP-LIVAMEASSSLTTNVVPSSALPEGQEKPSLLKWKG 320

Query: 175 PEKISRIYADWIDDIPLVNQSPSKTE 252
           P+KI+RIYADW+DD+PL   S SK E
Sbjct: 321 PKKINRIYADWLDDLPLSPSSTSKME 346