BLASTX nr result

ID: Coptis24_contig00022471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022471
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2...   464   e-171
ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun...   448   e-165
ref|XP_003538054.1| PREDICTED: beta-galactosidase 8-like [Glycin...   326   e-116
gb|ABK24373.1| unknown [Picea sitchensis]                             326   e-115
ref|XP_003606403.1| Beta-galactosidase [Medicago truncatula] gi|...   323   e-114

>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
            predicted protein [Populus trichocarpa]
          Length = 849

 Score =  464 bits (1195), Expect(2) = e-171
 Identities = 214/320 (66%), Positives = 264/320 (82%), Gaps = 2/320 (0%)
 Frame = -2

Query: 1578 ILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKD-ELPKASTWSWYKEKKGVQDKYSFTSP 1402
            IL DCKNV++NTAK+V+QR +G  L +  +  D  L  AS WSWYKE+ G+    SFT P
Sbjct: 412  ILADCKNVIFNTAKVVTQRHIGDALFSRSTTVDGNLVAASPWSWYKEEVGIWGNNSFTKP 471

Query: 1401 SLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLGHAALIFVNNKVVGFSYGNHD 1222
             LLEQI TTKDTSDFLWY+TS+ V+ G+ KE  L++ESLGHAAL+FVN + V F YGNHD
Sbjct: 472  GLLEQINTTKDTSDFLWYSTSLYVEAGQDKEHLLNIESLGHAALVFVNKRFVAFGYGNHD 531

Query: 1221 NANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFDVAGAGIFSVFLIDFN-TKDDLSSR 1045
            +A+F+  ++I L++GNN++ +LSM+IG+QNYGPWFDV GAGI SVFL+D + +K DLSS 
Sbjct: 532  DASFSLTREISLEEGNNTLDVLSMLIGVQNYGPWFDVQGAGIHSVFLVDLHKSKKDLSSG 591

Query: 1044 EWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINETLIWYKTSFIAPEGNGPLSLNLAS 865
            +WTYQVGLEGEYLGLD  SLANSSLW+ G  LP+N++LIWYK + IAPEGNGPL+LNLAS
Sbjct: 592  KWTYQVGLEGEYLGLDNVSLANSSLWSQGTSLPVNKSLIWYKATIIAPEGNGPLALNLAS 651

Query: 864  MGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGSYDASKCLKNCGQPAQILYHVPRSW 685
            MGKGQ W+NGQSIGRYWSAYL+PS GC ++CDYRG+Y++ KC K CGQPAQ LYH+PR+W
Sbjct: 652  MGKGQAWINGQSIGRYWSAYLSPSAGCTDNCDYRGAYNSFKCQKKCGQPAQTLYHIPRTW 711

Query: 684  VHSGENLLVLHEEIGGDPSK 625
            VH GENLLVLHEE+GGDPS+
Sbjct: 712  VHPGENLLVLHEELGGDPSQ 731



 Score =  165 bits (418), Expect(2) = e-171
 Identities = 76/119 (63%), Positives = 94/119 (78%)
 Frame = -3

Query: 626  KISVLTRTDQEICSLVSESDPPAVDSWKPNSEVMSAIPEVRLSCEQGRHVSSINFASFGT 447
            +IS+LTRT Q+ICS+VSE DPP  DSWKPN E MS  PEVRL+CE G H+++INFASFGT
Sbjct: 731  QISLLTRTGQDICSIVSEDDPPPADSWKPNLEFMSQSPEVRLTCEHGWHIAAINFASFGT 790

Query: 446  PTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALCT 270
            P G+CG  + G C+A ++L IVQ+ACIG E CS+P+S   LGDPCPGV+K   VEALC+
Sbjct: 791  PEGKCGTFTPGNCHA-DMLTIVQKACIGHERCSIPISAAKLGDPCPGVVKRFVVEALCS 848


>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
            gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
            [Ricinus communis]
          Length = 841

 Score =  448 bits (1153), Expect(2) = e-165
 Identities = 212/320 (66%), Positives = 257/320 (80%), Gaps = 2/320 (0%)
 Frame = -2

Query: 1578 ILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKDELP-KASTWSWYKEKKGVQDKYSFTSP 1402
            ILPDCKNV++NTAK++   +LG       +  +E+P +   WSWYKE+ G+    SFT+P
Sbjct: 406  ILPDCKNVIFNTAKVLIL-NLGDDFFAHSTSVNEIPLEQIVWSWYKEEVGIWGNNSFTAP 464

Query: 1401 SLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLGHAALIFVNNKVVGFSYGNHD 1222
             LLEQI TTKD SDFLWY+TS+ V   + K++ L++ESLGHAAL+FVN  +VG  YGNHD
Sbjct: 465  GLLEQINTTKDISDFLWYSTSISVNADQVKDIILNIESLGHAALVFVNKVLVG-KYGNHD 523

Query: 1221 NANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFDVAGAGIFSVFLI-DFNTKDDLSSR 1045
            +A+F+  +KI L +GNN++ LLSMMIG+QNYGPWFDV GAGI++V L+     K DLSS 
Sbjct: 524  DASFSLTEKISLIEGNNTLDLLSMMIGVQNYGPWFDVQGAGIYAVLLVGQSKVKIDLSSE 583

Query: 1044 EWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINETLIWYKTSFIAPEGNGPLSLNLAS 865
            +WTYQVGLEGEY GLDK SLANSSLWT G   PIN++LIWYK +F+APEG GPL+LNLA 
Sbjct: 584  KWTYQVGLEGEYFGLDKVSLANSSLWTQGASPPINKSLIWYKGTFVAPEGKGPLALNLAG 643

Query: 864  MGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGSYDASKCLKNCGQPAQILYHVPRSW 685
            MGKGQ WVNGQSIGRYW AYL+PSTGCN+SCDYRG+YD+ KCLK CGQPAQ LYH+PR+W
Sbjct: 644  MGKGQAWVNGQSIGRYWPAYLSPSTGCNDSCDYRGAYDSFKCLKKCGQPAQTLYHIPRTW 703

Query: 684  VHSGENLLVLHEEIGGDPSK 625
            VH GENLLVLHEE+GGDPSK
Sbjct: 704  VHPGENLLVLHEELGGDPSK 723



 Score =  160 bits (406), Expect(2) = e-165
 Identities = 78/119 (65%), Positives = 91/119 (76%)
 Frame = -3

Query: 626  KISVLTRTDQEICSLVSESDPPAVDSWKPNSEVMSAIPEVRLSCEQGRHVSSINFASFGT 447
            KISVLTRT  EICS+VSE DPP  DSWK +SE  S  PEVRL+CEQG H+ SINFASFGT
Sbjct: 723  KISVLTRTGHEICSIVSEDDPPPADSWKSSSEFKSQNPEVRLTCEQGWHIKSINFASFGT 782

Query: 446  PTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALCT 270
            P G CG  + G C+A ++L IVQ+ACIG+E CS+ +S   LGDPCPGVLK  AVEA C+
Sbjct: 783  PAGICGTFNPGSCHA-DMLDIVQKACIGQEGCSISISAANLGDPCPGVLKRFAVEARCS 840


>ref|XP_003538054.1| PREDICTED: beta-galactosidase 8-like [Glycine max]
          Length = 836

 Score =  326 bits (835), Expect(2) = e-116
 Identities = 165/324 (50%), Positives = 208/324 (64%), Gaps = 6/324 (1%)
 Frame = -2

Query: 1578 ILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKDELP---KASTWSWYKEKKGVQDKYSFT 1408
            ILPDCKNVV NTAKI S   +     TT SLKD        S WSW  E  G+    SF+
Sbjct: 400  ILPDCKNVVLNTAKITSASMISSF--TTESLKDVGSLDDSGSRWSWISEPIGISKADSFS 457

Query: 1407 SPSLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLGHAALIFVNNKVVGFSYGN 1228
            +  LLEQI TT D SD+LWY+ S+ +  G   + FL ++SLGHA   F+N K+ G   GN
Sbjct: 458  TFGLLEQINTTADRSDYLWYSLSIDLDAGA--QTFLHIKSLGHALHAFINGKLAGSGTGN 515

Query: 1227 HDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFDVAGAGIFSVFLIDF---NTKDD 1057
            H+ AN   +  I L  G N++ LLS+ +GLQNYG +FD  GAGI    ++      +  D
Sbjct: 516  HEKANVEVDIPITLVSGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKCLKNGSNVD 575

Query: 1056 LSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINETLIWYKTSFIAPEGNGPLSL 877
            LSS++WTYQVGL+ E LGL       S  W S   LP N+ L WYKT+F+AP GN P+++
Sbjct: 576  LSSKQWTYQVGLKNEDLGLSSGC---SGQWNSQSTLPTNQPLTWYKTNFVAPSGNNPVAI 632

Query: 876  NLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGSYDASKCLKNCGQPAQILYHV 697
            +   MGKG+ WVNGQSIGRYW  Y +P  GC +SC+YRG+YDASKCLKNCG+P+Q LYHV
Sbjct: 633  DFTGMGKGEAWVNGQSIGRYWPTYASPKGGCTDSCNYRGAYDASKCLKNCGKPSQTLYHV 692

Query: 696  PRSWVHSGENLLVLHEEIGGDPSK 625
            PRSW+    N LVL EE GG+P +
Sbjct: 693  PRSWLRPDRNTLVLFEESGGNPKQ 716



 Score =  122 bits (305), Expect(2) = e-116
 Identities = 63/121 (52%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = -3

Query: 629  QKISVLTRTDQEICSLVSESDPPAVDSWKPNSEV-MSAIPEVRLSCEQGRHV-SSINFAS 456
            ++IS  T+    +CS VSES PP VDSW  N+E     +P V L C     V SSI FAS
Sbjct: 715  KQISFATKQIGSVCSHVSESHPPPVDSWNSNTESGRKVVPVVSLECPYPNQVVSSIKFAS 774

Query: 455  FGTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEAL 276
            FGTP G CG   HGLC +   L IVQ+ACIG   C + +S    GDPC GV KSLAVEA 
Sbjct: 775  FGTPLGTCGNFKHGLCSSNKALSIVQKACIGSSSCRIELSVNTFGDPCKGVAKSLAVEAS 834

Query: 275  C 273
            C
Sbjct: 835  C 835


>gb|ABK24373.1| unknown [Picea sitchensis]
          Length = 861

 Score =  326 bits (835), Expect(2) = e-115
 Identities = 164/332 (49%), Positives = 217/332 (65%), Gaps = 14/332 (4%)
 Frame = -2

Query: 1578 ILPDCKNVVYNTAKIVSQRSLGHH------LTTTRSLKD-ELPKASTWSWYKEKKGVQDK 1420
            ILPDCKNVV+NTAKI SQ +          L  + S+K  +   A++WSW  E+ G+   
Sbjct: 407  ILPDCKNVVFNTAKIGSQTTSVQMNPANLILAGSNSMKGTDSANAASWSWLHEQIGIGGS 466

Query: 1419 YSFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGER-----KEVFLSVESLGHAALIFVNN 1255
             +F+ P LLEQI TT D+SD+LWYTTS+ V   E       +  L V+SLGHA  +F+N 
Sbjct: 467  NTFSKPGLLEQINTTVDSSDYLWYTTSIQVDDNEPFLHNGTQPVLHVQSLGHALHVFING 526

Query: 1254 KVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFDVAGAGIFS-VFLI 1078
            +  G   G+  ++       I LK G N++ LLS+ +GLQNYG +FD  GAGI   V L 
Sbjct: 527  EFAGRGAGSSSSSKIALQTPITLKSGKNNIDLLSITVGLQNYGSFFDTWGAGITGPVILQ 586

Query: 1077 DFNTKD-DLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINETLIWYKTSFIAP 901
             F   + DLS+++WTYQ+GL GE LG+       S+ W +G DLP  + +IWYKT+F AP
Sbjct: 587  GFKDGEHDLSTQQWTYQIGLTGEQLGIYSGDTKASAQWVAGSDLPTKQPMIWYKTNFDAP 646

Query: 900  EGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGSYDASKCLKNCGQ 721
             GN P++LNL  MGKG  WVNGQSIGRYW +Y+A  +GC +SCDYRG+Y ++KC  NCGQ
Sbjct: 647  SGNDPVALNLLGMGKGVAWVNGQSIGRYWPSYIASQSGCTDSCDYRGAYSSTKCQTNCGQ 706

Query: 720  PAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 625
            P+Q LYHVPRSW+    N+LVL EE+GGDP++
Sbjct: 707  PSQKLYHVPRSWIQPTGNVLVLFEELGGDPTQ 738



 Score =  117 bits (292), Expect(2) = e-115
 Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
 Frame = -3

Query: 626  KISVLTRTDQEICSLVSESDPPAVDSWKPNS----EVMSAIPEVRLSCEQGRH-VSSINF 462
            +IS +TR+   +C+ VSE+  P VDSWK ++    EV     E++L C   RH + SI F
Sbjct: 738  QISFMTRSVGSLCAQVSETHLPPVDSWKSSATSGLEVNKPKAELQLHCPSSRHLIKSIKF 797

Query: 461  ASFGTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVE 282
            ASFGT  G CG  ++G C   + + IV+EACIGRE CSV VS    GDPC G +K+LAVE
Sbjct: 798  ASFGTSKGSCGSFTYGHCNTNSTMSIVEEACIGRESCSVEVSIEKFGDPCKGTVKNLAVE 857

Query: 281  ALCT 270
            A C+
Sbjct: 858  ASCS 861


>ref|XP_003606403.1| Beta-galactosidase [Medicago truncatula] gi|355507458|gb|AES88600.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 839

 Score =  323 bits (827), Expect(2) = e-114
 Identities = 156/325 (48%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
 Frame = -2

Query: 1578 ILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKDELPK----ASTWSWYKEKKGVQDKYSF 1411
            ILPDCKNVV NTAK+ +   +      T SLK+++      +S WSW  E  G+    +F
Sbjct: 400  ILPDCKNVVLNTAKVNTASMISSF--ATESLKEKVDSLDSSSSGWSWISEPVGISTPDAF 457

Query: 1410 TSPSLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLGHAALIFVNNKVVGFSYG 1231
            T   LLEQI TT D SD+LWY+ S++ +     +  L +ESLGHA   FVN K+ G   G
Sbjct: 458  TKSGLLEQINTTADRSDYLWYSLSIVYEDNAGDQPVLHIESLGHALHAFVNGKLAGSKAG 517

Query: 1230 NHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFDVAGAGIFSVFLIDF---NTKD 1060
            +  NA    +  I L  G N++ LLS+ +GLQNYG ++D  GAGI    ++      +  
Sbjct: 518  SSGNAKVNVDIPITLVTGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVILKGLKNGSSV 577

Query: 1059 DLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINETLIWYKTSFIAPEGNGPLS 880
            DL+S++WTYQVGL+GE++GL   S  N   W S  +LP N+ L WYKT+F+AP G+ P++
Sbjct: 578  DLTSQQWTYQVGLQGEFVGL---SSGNVGQWNSQSNLPANQPLTWYKTNFVAPSGSNPVA 634

Query: 879  LNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGSYDASKCLKNCGQPAQILYH 700
            ++   MGKG+ WVNGQSIGRYW  Y++P++GC +SC+YRG+Y ASKCLKNCG+P+Q LYH
Sbjct: 635  IDFTGMGKGEAWVNGQSIGRYWPTYISPNSGCTDSCNYRGTYSASKCLKNCGKPSQTLYH 694

Query: 699  VPRSWVHSGENLLVLHEEIGGDPSK 625
            VPR+W+    N  VL EE GGDP+K
Sbjct: 695  VPRAWLKPDSNTFVLFEESGGDPTK 719



 Score =  117 bits (294), Expect(2) = e-114
 Identities = 60/121 (49%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
 Frame = -3

Query: 626  KISVLTRTDQEICSLVSESDPPAVDSWKPNSEVMSAI-PEVRLSCEQ-GRHVSSINFASF 453
            KIS  T+  + +CS V+ES PP VD+W  N+E    + P + L C    + +SSI FASF
Sbjct: 719  KISFGTKQIESVCSHVTESHPPPVDTWNSNAESERKVGPVLSLECPYPNQAISSIKFASF 778

Query: 452  GTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALC 273
            GTP G CG  +HG C +   L IVQ+ACIG   C++ VS    G+PC GV KSLAVEA C
Sbjct: 779  GTPRGTCGNYNHGSCSSNRALSIVQKACIGSSSCNIGVSINTFGNPCRGVTKSLAVEAAC 838

Query: 272  T 270
            T
Sbjct: 839  T 839


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