BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022466
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200481.1| FBD / Leucine Rich Repeat domains containing pr...    75   3e-11
sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-...    75   6e-11
dbj|BAB09888.1| unnamed protein product [Arabidopsis thaliana]         75   6e-11
ref|NP_191051.2| leucine rich repeat and F-Box domain-containing...    73   2e-10
dbj|BAD95186.1| hypothetical protein [Arabidopsis thaliana]            73   2e-10

>ref|NP_200481.1| FBD / Leucine Rich Repeat domains containing protein [Arabidopsis
            thaliana] gi|332009414|gb|AED96797.1| FBD / Leucine Rich
            Repeat domains containing protein [Arabidopsis thaliana]
          Length = 360

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
 Frame = -2

Query: 1309 VPDLNAWEMCAVDHNVPNLCIHGVSTKDAAELSGGLFTCISLTSLTL--ENFVLDLPRTV 1136
            V DL +W   AV   V  L I    T  A  L   L+TC SL +L L  +  +LD+PRTV
Sbjct: 49   VMDLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKLYGKKVLLDVPRTV 108

Query: 1135 GFPLLKTLKLDHVTIPSENLINKLFSNCPVLENLAVRRSNFITFNYREPLNIFVPNLKHL 956
              P LKTL+L+ +    E+ +  L S CPVLE+L++ R +   ++    L + VP+L+ L
Sbjct: 109  FLPSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVRED---YDNLRALVVIVPSLQRL 165

Query: 955  SLLFMHSYKKTD--ISAPNLKQF 893
            SL    +       I  P+LK F
Sbjct: 166  SLEIPGNCSSDGYVIVTPSLKYF 188


>sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-box protein At5g56700
          Length = 398

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
 Frame = -2

Query: 1303 DLNAWEMCAVDHNVPNLCIHGVSTKDAAELSGGLFTCISLTSLTL--ENFVLDLPRTVGF 1130
            DL +W   AV   V  L I    T  A  L   L+TC SL +L L  +  +LD+PRTV  
Sbjct: 89   DLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKLYGKKVLLDVPRTVFL 148

Query: 1129 PLLKTLKLDHVTIPSENLINKLFSNCPVLENLAVRRSNFITFNYREPLNIFVPNLKHLSL 950
            P LKTL+L+ +    E+ +  L S CPVLE+L++ R +   ++    L + VP+L+ LSL
Sbjct: 149  PSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVRED---YDNLRALVVIVPSLQRLSL 205

Query: 949  LFMHSYKKTD--ISAPNLKQF 893
                +       I  P+LK F
Sbjct: 206  EIPGNCSSDGYVIVTPSLKYF 226


>dbj|BAB09888.1| unnamed protein product [Arabidopsis thaliana]
          Length = 372

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
 Frame = -2

Query: 1303 DLNAWEMCAVDHNVPNLCIHGVSTKDAAELSGGLFTCISLTSLTL--ENFVLDLPRTVGF 1130
            DL +W   AV   V  L I    T  A  L   L+TC SL +L L  +  +LD+PRTV  
Sbjct: 63   DLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKLYGKKVLLDVPRTVFL 122

Query: 1129 PLLKTLKLDHVTIPSENLINKLFSNCPVLENLAVRRSNFITFNYREPLNIFVPNLKHLSL 950
            P LKTL+L+ +    E+ +  L S CPVLE+L++ R +   ++    L + VP+L+ LSL
Sbjct: 123  PSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVRED---YDNLRALVVIVPSLQRLSL 179

Query: 949  LFMHSYKKTD--ISAPNLKQF 893
                +       I  P+LK F
Sbjct: 180  EIPGNCSSDGYVIVTPSLKYF 200


>ref|NP_191051.2| leucine rich repeat and F-Box domain-containing protein [Arabidopsis
            thaliana] gi|79315081|ref|NP_001030863.1| leucine rich
            repeat and F-Box domain-containing protein [Arabidopsis
            thaliana] gi|145332847|ref|NP_001078289.1| leucine rich
            repeat and F-Box domain-containing protein [Arabidopsis
            thaliana] gi|63003866|gb|AAY25462.1| At3g54910
            [Arabidopsis thaliana] gi|332645789|gb|AEE79310.1|
            leucine rich repeat and F-Box domain-containing protein
            [Arabidopsis thaliana] gi|332645790|gb|AEE79311.1|
            leucine rich repeat and F-Box domain-containing protein
            [Arabidopsis thaliana] gi|332645791|gb|AEE79312.1|
            leucine rich repeat and F-Box domain-containing protein
            [Arabidopsis thaliana]
          Length = 373

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
 Frame = -2

Query: 1303 DLNAWEMCAVDHNVPNL-CIHGVSTKDAAELSGGLFTCISLTSLTLENFV-LDLPRTVGF 1130
            ++  W + AV H +  L  I+    +    L   L+TC SL  L L   + LD+PR    
Sbjct: 51   NIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILELCGEIRLDVPRMAFL 110

Query: 1129 PLLKTLKLDHVTIPSENLINKLFSNCPVLENLAVRRSNFITFNYREPLNIFVPNLKHLSL 950
            P LKTL+L  V   +E+ +++L SNCPVLE+L V   + +  +  E L + VP+L+ LSL
Sbjct: 111  PSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLV---DLLLSDSMEKLTVVVPSLQILSL 167

Query: 949  LFMHSYKKTD--ISAPNLKQF 893
               HSY+     I  P+LK F
Sbjct: 168  FIPHSYEIDGIVIETPSLKYF 188


>dbj|BAD95186.1| hypothetical protein [Arabidopsis thaliana]
          Length = 246

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
 Frame = -2

Query: 1303 DLNAWEMCAVDHNVPNL-CIHGVSTKDAAELSGGLFTCISLTSLTLENFV-LDLPRTVGF 1130
            ++  W + AV H +  L  I+    +    L   L+TC SL  L L   + LD+PR    
Sbjct: 51   NIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILELCGEIRLDVPRMAFL 110

Query: 1129 PLLKTLKLDHVTIPSENLINKLFSNCPVLENLAVRRSNFITFNYREPLNIFVPNLKHLSL 950
            P LKTL+L  V   +E+ +++L SNCPVLE+L V   + +  +  E L + VP+L+ LSL
Sbjct: 111  PSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLV---DLLLSDSMEKLTVVVPSLQILSL 167

Query: 949  LFMHSYKKTD--ISAPNLKQF 893
               HSY+     I  P+LK F
Sbjct: 168  FIPHSYEIDGIVIETPSLKYF 188