BLASTX nr result

ID: Coptis24_contig00022432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022432
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531568.1| PREDICTED: auxin-induced protein 5NG4-like [...   157   6e-37
ref|XP_003547067.1| PREDICTED: auxin-induced protein 5NG4-like [...   156   2e-36
ref|XP_003593114.1| Auxin-induced protein 5NG4 [Medicago truncat...   152   2e-35
emb|CBI37609.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002277059.1| PREDICTED: auxin-induced protein 5NG4-like [...   149   2e-34

>ref|XP_003531568.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 405

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/112 (67%), Positives = 98/112 (87%)
 Frame = -1

Query: 337 WKLGWNIRLLTVAYSGIFASGLIVTLVAWCVRLKGPLFVSIFNPLMLVLVALAGSVILAE 158
           WKLGWNIRLL VAYSGI ASG++V + AWC++++GPLF S+FNPLMLVLVA+AGS++L E
Sbjct: 255 WKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAIAGSLMLNE 314

Query: 157 KLHLGSVLGAVLIVTGLYLVLWGKSKEMKRMSTSQLIPSKSSRVSSEAIEVI 2
            L++GSV+GAVLIV GLY+VLWGKSKEMK +  +QL+PS++ R  +EAIEV+
Sbjct: 315 NLYVGSVVGAVLIVCGLYMVLWGKSKEMKNI--TQLVPSETIR-EAEAIEVV 363


>ref|XP_003547067.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 401

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/112 (66%), Positives = 97/112 (86%)
 Frame = -1

Query: 337 WKLGWNIRLLTVAYSGIFASGLIVTLVAWCVRLKGPLFVSIFNPLMLVLVALAGSVILAE 158
           WKLGWNIRLL VAYSGI ASG++V + AWC++++GPLF S+FNPLMLVLVA+ GS++L E
Sbjct: 252 WKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAITGSLMLNE 311

Query: 157 KLHLGSVLGAVLIVTGLYLVLWGKSKEMKRMSTSQLIPSKSSRVSSEAIEVI 2
            L++GSV+GAVLIV GLY+VLWGKSKEMK +  +QL+PS++ R  +EAIEV+
Sbjct: 312 NLYVGSVVGAVLIVCGLYMVLWGKSKEMKNI--TQLVPSETIR-EAEAIEVV 360


>ref|XP_003593114.1| Auxin-induced protein 5NG4 [Medicago truncatula]
           gi|355482162|gb|AES63365.1| Auxin-induced protein 5NG4
           [Medicago truncatula]
          Length = 394

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/112 (63%), Positives = 96/112 (85%)
 Frame = -1

Query: 337 WKLGWNIRLLTVAYSGIFASGLIVTLVAWCVRLKGPLFVSIFNPLMLVLVALAGSVILAE 158
           WKLGWNIRLL VAYSG+ ASGL+V + +WC++++GPLF S+FNPLML+ V +  S++L E
Sbjct: 252 WKLGWNIRLLAVAYSGVVASGLVVIVTSWCIKMRGPLFASVFNPLMLLFVTIVASLMLDE 311

Query: 157 KLHLGSVLGAVLIVTGLYLVLWGKSKEMKRMSTSQLIPSKSSRVSSEAIEVI 2
           KL+LGS +GAVLIV GLY+VLWGKSKEMKR+  +QL+PSK+++  +EAI+V+
Sbjct: 312 KLYLGSAIGAVLIVCGLYMVLWGKSKEMKRI--AQLVPSKNTQ-EAEAIQVV 360


>emb|CBI37609.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/111 (69%), Positives = 89/111 (80%)
 Frame = -1

Query: 337 WKLGWNIRLLTVAYSGIFASGLIVTLVAWCVRLKGPLFVSIFNPLMLVLVALAGSVILAE 158
           WKLGWNIRLLTVAY+G FASG +V LV+WCVR +GPLFVSIFNPLMLV VA+ GS+IL E
Sbjct: 233 WKLGWNIRLLTVAYTGFFASGFMVVLVSWCVRKRGPLFVSIFNPLMLVFVAILGSLILDE 292

Query: 157 KLHLGSVLGAVLIVTGLYLVLWGKSKEMKRMSTSQLIPSKSSRVSSEAIEV 5
           KLHLGS++G VLIV GLY +LW K  EMK M+T  L  SKSS+  +E I V
Sbjct: 293 KLHLGSIIGGVLIVIGLYAMLWAKGAEMKSMAT--LSHSKSSK-EAEIINV 340


>ref|XP_002277059.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 383

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/111 (69%), Positives = 89/111 (80%)
 Frame = -1

Query: 337 WKLGWNIRLLTVAYSGIFASGLIVTLVAWCVRLKGPLFVSIFNPLMLVLVALAGSVILAE 158
           WKLGWNIRLLTVAY+G FASG +V LV+WCVR +GPLFVSIFNPLMLV VA+ GS+IL E
Sbjct: 250 WKLGWNIRLLTVAYTGFFASGFMVVLVSWCVRKRGPLFVSIFNPLMLVFVAILGSLILDE 309

Query: 157 KLHLGSVLGAVLIVTGLYLVLWGKSKEMKRMSTSQLIPSKSSRVSSEAIEV 5
           KLHLGS++G VLIV GLY +LW K  EMK M+T  L  SKSS+  +E I V
Sbjct: 310 KLHLGSIIGGVLIVIGLYAMLWAKGAEMKSMAT--LSHSKSSK-EAEIINV 357


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