BLASTX nr result
ID: Coptis24_contig00022431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022431 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274824.1| PREDICTED: uncharacterized protein LOC100245... 85 7e-15 ref|XP_002320984.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 ref|NP_001147023.1| long cell-linked locus protein [Zea mays] gi... 62 5e-08 ref|XP_002301497.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 gb|ACR34783.1| unknown [Zea mays] 60 2e-07 >ref|XP_002274824.1| PREDICTED: uncharacterized protein LOC100245192 [Vitis vinifera] Length = 174 Score = 84.7 bits (208), Expect = 7e-15 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 4/86 (4%) Frame = -1 Query: 295 DFNGDDGDSVYH-QEVRKSYLI---EENYGCGFDEDERIHGEIVAVEDEAIDLKADEFIA 128 +FNGDDG V +E RKS+L+ EE+ GCG E+E E ID+KA+EFIA Sbjct: 100 EFNGDDGGEVGDGEEARKSFLMGGDEEDCGCGGCEEE-----------EGIDVKAEEFIA 148 Query: 127 NFYRQMKMQRQISYLQYDEMLDRGTN 50 FY QMK+QRQISYLQY+EML+RGT+ Sbjct: 149 KFYAQMKLQRQISYLQYNEMLNRGTS 174 >ref|XP_002320984.1| predicted protein [Populus trichocarpa] gi|222861757|gb|EEE99299.1| predicted protein [Populus trichocarpa] Length = 186 Score = 62.0 bits (149), Expect = 5e-08 Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Frame = -1 Query: 295 DFNGDDGDSVYHQEVRKSYLIEENYGCGFDEDE-RIHGEIVAVEDEAIDLKADEFIANFY 119 D + D Y+ R+S+L++ G DE+E E + E+E ID++A++FIA F Sbjct: 108 DIHQDGSVYEYYDGTRRSFLLKS----GEDEEEYETCEEKIPAEEEGIDMRAEQFIAKFR 163 Query: 118 RQMKMQRQISYLQYDEMLDRGTN 50 +QM++QRQISYLQY E +GT+ Sbjct: 164 QQMRLQRQISYLQYHETPKKGTS 186 >ref|NP_001147023.1| long cell-linked locus protein [Zea mays] gi|195606578|gb|ACG25119.1| long cell-linked locus protein [Zea mays] Length = 205 Score = 62.0 bits (149), Expect = 5e-08 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 14/90 (15%) Frame = -1 Query: 286 GDDGDSVYHQEVRKSYLIEENYGCGFDED--ERIHGEIVAV------------EDEAIDL 149 GDD S H E + +E CG DE ER+ E ED +D+ Sbjct: 117 GDDPRSARHVEEEE----DELSCCGDDEQLLERVVAEACRASTTAGSVAGEGGEDAGVDV 172 Query: 148 KADEFIANFYRQMKMQRQISYLQYDEMLDR 59 KA+EFIA FY QMK+QRQIS+LQY+EM++R Sbjct: 173 KAEEFIARFYAQMKLQRQISWLQYNEMMER 202 >ref|XP_002301497.1| predicted protein [Populus trichocarpa] gi|222843223|gb|EEE80770.1| predicted protein [Populus trichocarpa] Length = 187 Score = 60.5 bits (145), Expect = 1e-07 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 10/92 (10%) Frame = -1 Query: 295 DFNGD--------DGDSVY--HQEVRKSYLIEENYGCGFDEDERIHGEIVAVEDEAIDLK 146 DF G+ DG SVY + +R+S+L++ G +E+ E + E+E ID++ Sbjct: 100 DFEGEVCEDDIQQDG-SVYECYDGMRRSFLLKG----GDEEEYETCEEKIPAEEEGIDMR 154 Query: 145 ADEFIANFYRQMKMQRQISYLQYDEMLDRGTN 50 A+EFIA F +QM++QRQISYLQY E +GT+ Sbjct: 155 AEEFIAKFRQQMRLQRQISYLQYHETPKKGTS 186 >gb|ACR34783.1| unknown [Zea mays] Length = 65 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/37 (70%), Positives = 33/37 (89%) Frame = -1 Query: 169 EDEAIDLKADEFIANFYRQMKMQRQISYLQYDEMLDR 59 ED +D+KADEFIA FY QMK+QRQIS+LQY+EM++R Sbjct: 26 EDAGVDVKADEFIARFYAQMKLQRQISWLQYNEMMER 62