BLASTX nr result

ID: Coptis24_contig00022413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022413
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33740.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002283886.1| PREDICTED: probable indole-3-acetic acid-ami...   145   3e-33
emb|CAN70815.1| hypothetical protein VITISV_042944 [Vitis vinifera]   145   3e-33
ref|XP_002885948.1| GH3.1 [Arabidopsis lyrata subsp. lyrata] gi|...   143   2e-32
ref|XP_003516612.1| PREDICTED: probable indole-3-acetic acid-ami...   142   2e-32

>emb|CBI33740.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +3

Query: 6   TEFLGRYKLGGATDRDTFKSKIPMITYEDLQPDILRIANGDRSPILSSHPISEFLTSSGT 185
           TE+L R+KL GATDRDTFKSK+P++TYEDLQPDI RIANGDRSPILSSHPISEFLTSSGT
Sbjct: 51  TEYLQRFKLAGATDRDTFKSKVPVVTYEDLQPDIQRIANGDRSPILSSHPISEFLTSSGT 110

Query: 186 SAGERKLMPTIHEELDRRQ 242
           SAGERKLMPTIHEE DRRQ
Sbjct: 111 SAGERKLMPTIHEEWDRRQ 129


>ref|XP_002283886.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 600

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +3

Query: 6   TEFLGRYKLGGATDRDTFKSKIPMITYEDLQPDILRIANGDRSPILSSHPISEFLTSSGT 185
           TE+L R+KL GATDRDTFKSK+P++TYEDLQPDI RIANGDRSPILSSHPISEFLTSSGT
Sbjct: 51  TEYLQRFKLAGATDRDTFKSKVPVVTYEDLQPDIQRIANGDRSPILSSHPISEFLTSSGT 110

Query: 186 SAGERKLMPTIHEELDRRQ 242
           SAGERKLMPTIHEE DRRQ
Sbjct: 111 SAGERKLMPTIHEEWDRRQ 129


>emb|CAN70815.1| hypothetical protein VITISV_042944 [Vitis vinifera]
          Length = 607

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +3

Query: 6   TEFLGRYKLGGATDRDTFKSKIPMITYEDLQPDILRIANGDRSPILSSHPISEFLTSSGT 185
           TE+L R+KL GATDRDTFKSK+P++TYEDLQPDI RIANGDRSPILSSHPISEFLTSSGT
Sbjct: 51  TEYLQRFKLAGATDRDTFKSKVPVVTYEDLQPDIQRIANGDRSPILSSHPISEFLTSSGT 110

Query: 186 SAGERKLMPTIHEELDRRQ 242
           SAGERKLMPTIHEE DRRQ
Sbjct: 111 SAGERKLMPTIHEEWDRRQ 129


>ref|XP_002885948.1| GH3.1 [Arabidopsis lyrata subsp. lyrata]
           gi|297331788|gb|EFH62207.1| GH3.1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 590

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/81 (86%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   HTEFLGRYKLGGATDRDTFKSKIPMITYEDLQPDILRIANGDRSPILSSHPISEFLTSSG 182
           +TE+L R+ LGGATDRDTFK+KIP+ITYEDLQP+I RIA+GDRSPILSSHPISEFLTSSG
Sbjct: 50  NTEYLRRFNLGGATDRDTFKTKIPVITYEDLQPEIQRIADGDRSPILSSHPISEFLTSSG 109

Query: 183 TSAGERKLMPTIHEELDRRQL 245
           TSAGERKLMPTI EELDRRQL
Sbjct: 110 TSAGERKLMPTIREELDRRQL 130


>ref|XP_003516612.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Glycine max]
          Length = 631

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +3

Query: 6   TEFLGRYKLGGATDRDTFKSKIPMITYEDLQPDILRIANGDRSPILSSHPISEFLTSSGT 185
           TE+L R+ L GATDRDTFKSK+P++TYEDLQPDI RIANGDRSPIL +HPISEFLTSSGT
Sbjct: 83  TEYLKRFALNGATDRDTFKSKVPVVTYEDLQPDIERIANGDRSPILCAHPISEFLTSSGT 142

Query: 186 SAGERKLMPTIHEELDRRQL 245
           SAGERKLMPTIHEE+DRRQL
Sbjct: 143 SAGERKLMPTIHEEMDRRQL 162


Top