BLASTX nr result

ID: Coptis24_contig00022412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022412
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera] gi...    84   1e-14
ref|XP_002527366.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_004152605.1| PREDICTED: crt homolog 1-like [Cucumis sativ...    79   5e-13
gb|AFW74654.1| hypothetical protein ZEAMMB73_664224 [Zea mays]         79   5e-13
gb|AFW74653.1| hypothetical protein ZEAMMB73_664224 [Zea mays]         79   5e-13

>ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera]
           gi|302142085|emb|CBI19288.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/69 (60%), Positives = 49/69 (71%)
 Frame = -1

Query: 207 MLPGPAIPILSQTFLVWQLLLSTVILGRKYTFNQIXXXXXXXXXXXXXVTSGSDEGQLLS 28
           MLPGPAIP+L+QTFLVWQL LST+ILGRKY+FNQI             V SGS+  Q+LS
Sbjct: 178 MLPGPAIPLLNQTFLVWQLALSTLILGRKYSFNQILGCFLVAAGVVTAVASGSNGDQMLS 237

Query: 27  NIDIIWPGL 1
            I+ IWP L
Sbjct: 238 GIEFIWPAL 246


>ref|XP_002527366.1| conserved hypothetical protein [Ricinus communis]
           gi|223533285|gb|EEF35038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 207 MLPGPAIPILSQTFLVWQLLLSTVILGRKYTFNQIXXXXXXXXXXXXXVTSGSDEGQLLS 28
           M+PGPAIPIL+QTFLVWQL  S ++LGR+Y+FNQI             V+SGS+  Q+LS
Sbjct: 184 MIPGPAIPILNQTFLVWQLAFSALLLGRRYSFNQISGCFLVAIGVVVAVSSGSNADQMLS 243

Query: 27  NIDIIWPGL 1
            ++ IWP L
Sbjct: 244 GVEFIWPAL 252


>ref|XP_004152605.1| PREDICTED: crt homolog 1-like [Cucumis sativus]
           gi|449516193|ref|XP_004165132.1| PREDICTED: crt homolog
           1-like [Cucumis sativus]
          Length = 449

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/68 (57%), Positives = 47/68 (69%)
 Frame = -1

Query: 204 LPGPAIPILSQTFLVWQLLLSTVILGRKYTFNQIXXXXXXXXXXXXXVTSGSDEGQLLSN 25
           LPGPAIPILSQTFLVWQL+ S ++LGRKY++NQI             V SGSD GQ+LS 
Sbjct: 203 LPGPAIPILSQTFLVWQLVFSAILLGRKYSWNQIAGCVIVTAGVVVAVGSGSDAGQMLSG 262

Query: 24  IDIIWPGL 1
           +  +WP L
Sbjct: 263 VAPLWPVL 270


>gb|AFW74654.1| hypothetical protein ZEAMMB73_664224 [Zea mays]
          Length = 211

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 207 MLPGPAIPILSQTFLVWQLLLSTVILGRKYTFNQIXXXXXXXXXXXXXVTSGSDEGQLLS 28
           MLPGPAIPILSQ+FLVWQL+ S ++LGR Y+  Q+             V SG+D+GQLLS
Sbjct: 97  MLPGPAIPILSQSFLVWQLIFSALLLGRTYSARQVIGCFLVVSGVILAVASGADDGQLLS 156

Query: 27  NIDIIWPGL 1
           ++ +IWP L
Sbjct: 157 DVKLIWPAL 165


>gb|AFW74653.1| hypothetical protein ZEAMMB73_664224 [Zea mays]
          Length = 221

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 207 MLPGPAIPILSQTFLVWQLLLSTVILGRKYTFNQIXXXXXXXXXXXXXVTSGSDEGQLLS 28
           MLPGPAIPILSQ+FLVWQL+ S ++LGR Y+  Q+             V SG+D+GQLLS
Sbjct: 97  MLPGPAIPILSQSFLVWQLIFSALLLGRTYSARQVIGCFLVVSGVILAVASGADDGQLLS 156

Query: 27  NIDIIWPGL 1
           ++ +IWP L
Sbjct: 157 DVKLIWPAL 165


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