BLASTX nr result

ID: Coptis24_contig00022397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022397
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134083.1| PREDICTED: probable cellulose synthase A cat...    68   1e-16
ref|XP_004173233.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...    68   1e-16
ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-16
ref|XP_002529321.1| cellulose synthase, putative [Ricinus commun...    68   7e-16
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]     59   1e-15

>ref|XP_004134083.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Cucumis sativus]
          Length = 740

 Score = 67.8 bits (164), Expect(2) = 1e-16
 Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +1

Query: 151 MDIFMKMMGMKDINFNPTDKRLKEEEIERYQRDIYDFNIDEKFQLILATTASLNIASLFV 330
           +DI MK  G ++++F PT+K   +++++RY+ D+YDF     F   +A    LN+ +L V
Sbjct: 615 LDILMKKFGARNVSFVPTNKVTDDDQMQRYEMDVYDFQASILFLAPMAGLVVLNLVALAV 674

Query: 331 GITRVIGG-KTCSDLFGQIFLSFMIGVVNYP 420
           G+ R++   +   + FGQ+FL F I ++++P
Sbjct: 675 GLGRIVASLENWEETFGQLFLCFYILLMSFP 705



 Score = 43.5 bits (101), Expect(2) = 1e-16
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +2

Query: 5   PWFAIFAIVYVSPTLQHLVETISNGGSFKMYWNEERLWFIQSV 133
           P+F ++  +++S T  HL E + + GS K + NE+R+W I+ +
Sbjct: 565 PFFLVYCFIFISATFSHLHEVLISEGSVKKWLNEQRIWMIKGI 607


>ref|XP_004173233.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase-like protein
           G2-like, partial [Cucumis sativus]
          Length = 501

 Score = 67.8 bits (164), Expect(2) = 1e-16
 Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +1

Query: 151 MDIFMKMMGMKDINFNPTDKRLKEEEIERYQRDIYDFNIDEKFQLILATTASLNIASLFV 330
           +DI MK  G ++++F PT+K   +++++RY+ D+YDF     F   +A    LN+ +L V
Sbjct: 376 LDILMKKFGARNVSFVPTNKVTDDDQMQRYEMDVYDFQASILFLAPMAGLVVLNLVALAV 435

Query: 331 GITRVIGG-KTCSDLFGQIFLSFMIGVVNYP 420
           G+ R++   +   + FGQ+FL F I ++++P
Sbjct: 436 GLGRIVASLENWEETFGQLFLCFYILLMSFP 466



 Score = 43.5 bits (101), Expect(2) = 1e-16
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +2

Query: 5   PWFAIFAIVYVSPTLQHLVETISNGGSFKMYWNEERLWFIQSV 133
           P+F ++  +++S T  HL E + + GS K + NE+R+W I+ +
Sbjct: 326 PFFLVYCFIFISATFSHLHEVLISEGSVKKWLNEQRIWMIKGI 368


>ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score = 60.5 bits (145), Expect(2) = 5e-16
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = +1

Query: 151 MDIFMKMMGMKDINFNPTDKRLKEEEIERYQRDIYDFNIDEKFQLILATTASLNIASLFV 330
           +D  MK  GM++ +F PT+K   +E++  YQ    +F         + T   LNI S   
Sbjct: 595 LDAIMKCFGMREASFLPTNKVADDEQVALYQMGKLNFQASTMILTPIITLIILNIVSFIG 654

Query: 331 GITRVIGGKTCSDLFGQIFLSFMIGVVNYP 420
           G+ R+    + ++ FGQ+FLS  I +VNYP
Sbjct: 655 GVARMFIAGSWNETFGQVFLSLYILMVNYP 684



 Score = 48.5 bits (114), Expect(2) = 5e-16
 Identities = 18/47 (38%), Positives = 31/47 (65%)
 Frame = +2

Query: 8   WFAIFAIVYVSPTLQHLVETISNGGSFKMYWNEERLWFIQSVIPYLF 148
           WF +F+ ++++  L+HL E +S G S +   NE+R+W ++SV  Y F
Sbjct: 546 WFMVFSFIFLASLLKHLEEILSTGASIQTLLNEQRVWMMKSVTAYTF 592


>ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis]
           gi|223531245|gb|EEF33090.1| cellulose synthase, putative
           [Ricinus communis]
          Length = 762

 Score = 68.2 bits (165), Expect(2) = 7e-16
 Identities = 35/90 (38%), Positives = 53/90 (58%)
 Frame = +1

Query: 151 MDIFMKMMGMKDINFNPTDKRLKEEEIERYQRDIYDFNIDEKFQLILATTASLNIASLFV 330
           +D  MK +G+++ +F PT+K   +++I+ Y+   +DF    +    LAT ASLN+AS FV
Sbjct: 607 LDAIMKTLGLREASFLPTNKVEDDDQIKLYEMGKFDFQASTRLLAPLATLASLNMASFFV 666

Query: 331 GITRVIGGKTCSDLFGQIFLSFMIGVVNYP 420
           GI R+I          Q+ LSF I  +NYP
Sbjct: 667 GIIRMIFAGDLDKYLLQVLLSFYILAINYP 696



 Score = 40.4 bits (93), Expect(2) = 7e-16
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +2

Query: 2   DPWFAIFAIVYVSPTLQHLVETISNGGSFKMYWNEERLWFIQSVIPYLF 148
           +P F IF  V+ S    HL E +  G SF+   NE+R+W I++V  + +
Sbjct: 556 NPCFFIFIFVFTSAIAIHLFEVLYTGASFRTMINEQRIWTIRAVTCFTY 604


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score = 59.3 bits (142), Expect(2) = 1e-15
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = +1

Query: 151 MDIFMKMMGMKDINFNPTDKRLKEEEIERYQRDIYDFNIDEKFQLILATTASLNIASLFV 330
           +D  MK  GM++ +F PT+K   +E++  YQ    +F         + T   LN+ S   
Sbjct: 595 LDAIMKCFGMREASFLPTNKVADDEQVALYQMGKLNFQASTTILTPIITLIILNMVSFIG 654

Query: 331 GITRVIGGKTCSDLFGQIFLSFMIGVVNYP 420
           G+ R+    + ++ FGQ+FLS  I +VNYP
Sbjct: 655 GVARMFIAGSWNETFGQVFLSLYILMVNYP 684



 Score = 48.5 bits (114), Expect(2) = 1e-15
 Identities = 18/47 (38%), Positives = 31/47 (65%)
 Frame = +2

Query: 8   WFAIFAIVYVSPTLQHLVETISNGGSFKMYWNEERLWFIQSVIPYLF 148
           WF +F+ ++++  L+HL E +S G S +   NE+R+W ++SV  Y F
Sbjct: 546 WFMVFSFIFLASLLKHLEEILSTGASIQTLLNEQRVWMMKSVTAYTF 592


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