BLASTX nr result

ID: Coptis24_contig00022381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022381
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-li...   228   5e-58
ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidops...   227   9e-58
ref|XP_002889076.1| integral membrane family protein [Arabidopsi...   227   9e-58
ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57

>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  229 bits (583), Expect = 2e-58
 Identities = 111/127 (87%), Positives = 119/127 (93%)
 Frame = +1

Query: 1   LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTMWRFLPAAMIF 180
           LLSIINKWA+MKFPYPGALTALQYFTSAAGVL+ G  K+LEHDSL  LTMWRFLPAA++F
Sbjct: 53  LLSIINKWAIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLDLLTMWRFLPAAIMF 112

Query: 181 YLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVL 360
           YLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TWLSLSTIF GSVL
Sbjct: 113 YLSLFTNSELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLSLSTIFGGSVL 172

Query: 361 YVLTDYQ 381
           YVLTDYQ
Sbjct: 173 YVLTDYQ 179


>ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
          Length = 382

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/127 (85%), Positives = 119/127 (93%)
 Frame = +1

Query: 1   LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTMWRFLPAAMIF 180
           LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFG+LK+LEHD L  +TMW+FLPAA+IF
Sbjct: 60  LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEHDPLDLMTMWQFLPAAIIF 119

Query: 181 YLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVL 360
           YLSLFTNSELLLHANVDTFIVFRS VP+FVA+GE L+LHQPWPS +TW SL TIFAGSVL
Sbjct: 120 YLSLFTNSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSGKTWASLGTIFAGSVL 179

Query: 361 YVLTDYQ 381
           YV+TDYQ
Sbjct: 180 YVVTDYQ 186


>ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]
           gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName:
           Full=GDP-mannose transporter GONST3; AltName:
           Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3
           gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein;
           69155-70273 [Arabidopsis thaliana]
           gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26
           [Arabidopsis thaliana] gi|29329821|emb|CAD83087.1|
           GONST3 Golgi Nucleotide sugar transporter [Arabidopsis
           thaliana] gi|332197705|gb|AEE35826.1| golgi nucleotide
           sugar transporter 3 [Arabidopsis thaliana]
          Length = 372

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/127 (84%), Positives = 119/127 (93%)
 Frame = +1

Query: 1   LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTMWRFLPAAMIF 180
           LLSIINKWA+MKFPYPGALTA+QYFTSAAGVLL  ++K++EHDSL+ LTMWRFLPAAMIF
Sbjct: 48  LLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIF 107

Query: 181 YLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVL 360
           YLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TW SL+TIF GS+L
Sbjct: 108 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLL 167

Query: 361 YVLTDYQ 381
           YV TDYQ
Sbjct: 168 YVFTDYQ 174


>ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334917|gb|EFH65335.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/127 (84%), Positives = 118/127 (92%)
 Frame = +1

Query: 1   LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTMWRFLPAAMIF 180
           LLSIINKWA+MKFPYPGALTA+QYFTSAAGV L  ++K++EHDSL+ LTMWRFLPAAMIF
Sbjct: 48  LLSIINKWAIMKFPYPGALTAMQYFTSAAGVFLCAQMKLIEHDSLNLLTMWRFLPAAMIF 107

Query: 181 YLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVL 360
           YLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE LYLHQPWPS++TW SL+TIF GS+L
Sbjct: 108 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLHQPWPSVKTWGSLATIFGGSLL 167

Query: 361 YVLTDYQ 381
           YV TDYQ
Sbjct: 168 YVFTDYQ 174


>ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|222851542|gb|EEE89089.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  226 bits (576), Expect = 1e-57
 Identities = 109/127 (85%), Positives = 119/127 (93%)
 Frame = +1

Query: 1   LLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLHFLTMWRFLPAAMIF 180
           LLSIINKWAVMKFPYPGALTALQYFTSAAGVL+ G  +++EHDSL  LTMWRFLPAA++F
Sbjct: 26  LLSIINKWAVMKFPYPGALTALQYFTSAAGVLVCGWFRVVEHDSLDLLTMWRFLPAAVMF 85

Query: 181 YLSLFTNSELLLHANVDTFIVFRSGVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVL 360
           YLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TWLSL+TIF GSVL
Sbjct: 86  YLSLFTNSELLLHANVDTFIVFRSIVPIFVAIGETLFLHQPWPSLKTWLSLATIFGGSVL 145

Query: 361 YVLTDYQ 381
           YVLTDYQ
Sbjct: 146 YVLTDYQ 152


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