BLASTX nr result

ID: Coptis24_contig00022380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022380
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39009.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-li...   131   5e-29
gb|ABO41839.1| putative integral membrane protein [Gossypium arb...   130   8e-29
gb|ABO41833.1| putative integral membrane protein [Gossypium rai...   130   8e-29
gb|ACD56609.1| putative integral membrane protein [Gossypioides ...   129   2e-28

>emb|CBI39009.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/71 (87%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   AMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLSLSTIFS 182
           A+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL+QPWP+++TWLSL+TIF 
Sbjct: 123 AVIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFG 182

Query: 183 GSVLYVLTDYQ 215
           GSVLYVLTDYQ
Sbjct: 183 GSVLYVLTDYQ 193


>ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-like [Vitis vinifera]
          Length = 374

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/71 (87%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   AMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLSLSTIFS 182
           A+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL+QPWP+++TWLSL+TIF 
Sbjct: 108 AVIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFG 167

Query: 183 GSVLYVLTDYQ 215
           GSVLYVLTDYQ
Sbjct: 168 GSVLYVLTDYQ 178


>gb|ABO41839.1| putative integral membrane protein [Gossypium arboreum]
           gi|133902315|gb|ABO41844.1| putative integral membrane
           protein [Gossypium hirsutum]
          Length = 369

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = +3

Query: 3   AMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLSLSTIFS 182
           A+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL QPWPS++TW+SL TIF 
Sbjct: 105 AIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLSQPWPSLKTWISLGTIFG 164

Query: 183 GSVLYVLTDYQ 215
           GSVLYVLTDYQ
Sbjct: 165 GSVLYVLTDYQ 175


>gb|ABO41833.1| putative integral membrane protein [Gossypium raimondii]
          Length = 369

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = +3

Query: 3   AMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLSLSTIFS 182
           A+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYL QPWPS++TW+SL TIF 
Sbjct: 105 AIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLSQPWPSLKTWISLGTIFG 164

Query: 183 GSVLYVLTDYQ 215
           GSVLYVLTDYQ
Sbjct: 165 GSVLYVLTDYQ 175


>gb|ACD56609.1| putative integral membrane protein [Gossypioides kirkii]
          Length = 371

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/71 (85%), Positives = 67/71 (94%)
 Frame = +3

Query: 3   AMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLRQPWPSIRTWLSLSTIFS 182
           A+IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE L+L QPWPS++TW+SL TIF 
Sbjct: 105 AIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLSQPWPSLKTWISLGTIFG 164

Query: 183 GSVLYVLTDYQ 215
           GSVLYVLTDYQ
Sbjct: 165 GSVLYVLTDYQ 175


Top