BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022298
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   129   7e-28
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   129   9e-28
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   124   4e-26
emb|CBI23311.3| unnamed protein product [Vitis vinifera]              120   4e-25
ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumi...   120   6e-25

>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  129 bits (325), Expect = 7e-28
 Identities = 83/179 (46%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
 Frame = -2

Query: 804 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 643
           MAL  + GS  K G       +E+   F  V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGGD------EELGLGFAPV--TRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 642 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHF 469
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 468 AYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 292
           AY TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDE 171


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  129 bits (324), Expect = 9e-28
 Identities = 81/179 (45%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = -2

Query: 804 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 643
           MAL  + GS  K G        + +   G V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGG--------DEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 642 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHF 469
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 468 AYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 292
           A+ TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AFSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDE 171


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  124 bits (310), Expect = 4e-26
 Identities = 78/172 (45%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
 Frame = -2

Query: 747 DFDEMDKDFGVVRCTGAFGRKRVEPSPC------SSPFRTPLKRQCSVK----------- 619
           D DE  K  G VR T +FGRKR+  S         SP +TPLKR CS++           
Sbjct: 18  DSDEAFKRLGCVRYTRSFGRKRIVISNAVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKR 77

Query: 618 ---LNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHFAYHTPSS 448
              L  +KS LE LPQDILVR+LC V HDDL++L +VS +IR+ATL+A+  HFAY TP  
Sbjct: 78  LCSLEPEKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRK 137

Query: 447 KTASLKSFRIVDD-EYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSP 295
             A        ++   FD    PNAP   + + SR   +NL DISVALF SP
Sbjct: 138 IPAFRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFASP 189


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  120 bits (301), Expect = 4e-25
 Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -2

Query: 651 RTPLKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKN 478
           RTPLKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK 
Sbjct: 308 RTPLKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKK 367

Query: 477 WHFAYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHS 298
            HFAY TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S
Sbjct: 368 SHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSS 427

Query: 297 PE 292
            E
Sbjct: 428 DE 429


>ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumis sativus]
          Length = 190

 Score =  120 bits (300), Expect = 6e-25
 Identities = 79/180 (43%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
 Frame = -2

Query: 804 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 643
           MAL  K G L      +  D      DFGVVR T   GRKRV      E SP     + P
Sbjct: 1   MALGKKTGCLKSKSVVSAAD---KGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAP 57

Query: 642 LKRQCSV---KLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWH 472
            KR+C+V    +  D+SLLEALPQ+IL+R+LCGVEHDDL++L  VS++I +ATLIAK+ H
Sbjct: 58  SKRRCNVVSTAVEDDRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSH 117

Query: 471 FAYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 292
           FAY TPS       +  + D   FD    PNA  P +   +    + L++IS+ALF   E
Sbjct: 118 FAYSTPSKVRRFRTAIELDDSSDFDEIEAPNA-CPTRRFRTPLNRKKLAEISIALFAEEE 176