BLASTX nr result

ID: Coptis24_contig00022292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022292
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...   100   2e-19
gb|ABK95031.1| unknown [Populus trichocarpa]                          100   2e-19
dbj|BAF00568.1| hypothetical protein [Arabidopsis thaliana]            97   2e-18
ref|XP_002865559.1| hypothetical protein ARALYDRAFT_917584 [Arab...    96   2e-18
ref|XP_002865555.1| hypothetical protein ARALYDRAFT_331182 [Arab...    96   2e-18

>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/60 (75%), Positives = 57/60 (95%)
 Frame = -2

Query: 181 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSL 2
           + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA+ G+G+L
Sbjct: 3   KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTL 62


>gb|ABK95031.1| unknown [Populus trichocarpa]
          Length = 450

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/60 (75%), Positives = 57/60 (95%)
 Frame = -2

Query: 181 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSL 2
           + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA+ G+G+L
Sbjct: 3   KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTL 62


>dbj|BAF00568.1| hypothetical protein [Arabidopsis thaliana]
          Length = 184

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/59 (72%), Positives = 53/59 (89%)
 Frame = -2

Query: 178 FSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSL 2
           F GL HLF+T+FLY FS+F+V P ITD++M+ALCPG++ECSLAIYLSGFQQ +TGVGSL
Sbjct: 7   FHGLGHLFITIFLYCFSSFIVAPVITDISMAALCPGKDECSLAIYLSGFQQVITGVGSL 65


>ref|XP_002865559.1| hypothetical protein ARALYDRAFT_917584 [Arabidopsis lyrata subsp.
           lyrata] gi|297311394|gb|EFH41818.1| hypothetical protein
           ARALYDRAFT_917584 [Arabidopsis lyrata subsp. lyrata]
          Length = 147

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/59 (72%), Positives = 53/59 (89%)
 Frame = -2

Query: 178 FSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSL 2
           F GL HLF T+FLY FS+F+V P+ITD++M+ALCPG++ECSLAIYLSGFQQ +TGVGSL
Sbjct: 7   FHGLGHLFFTIFLYCFSSFIVAPAITDISMAALCPGKDECSLAIYLSGFQQVITGVGSL 65


>ref|XP_002865555.1| hypothetical protein ARALYDRAFT_331182 [Arabidopsis lyrata subsp.
           lyrata] gi|297311390|gb|EFH41814.1| hypothetical protein
           ARALYDRAFT_331182 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/59 (72%), Positives = 53/59 (89%)
 Frame = -2

Query: 178 FSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSL 2
           F GL HLF T+FLY FS+F+V P+ITD++M+ALCPG++ECSLAIYLSGFQQ +TGVGSL
Sbjct: 7   FHGLGHLFFTIFLYCFSSFIVAPAITDISMAALCPGKDECSLAIYLSGFQQVITGVGSL 65


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