BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022272
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   115   1e-24
ref|XP_002874853.1| hypothetical protein ARALYDRAFT_911822 [Arab...   116   1e-23
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   115   2e-23
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   115   2e-23
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   114   5e-23

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
            gi|147853333|emb|CAN82327.1| hypothetical protein
            VITISV_041807 [Vitis vinifera]
            gi|297740788|emb|CBI30970.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  115 bits (289), Expect(2) = 1e-24
 Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
 Frame = -1

Query: 1013 AQLVCITCQKLSKEPQFFRSVDLRDLWNYVDWKSGDKKKKLAKEAINRSGGGLVEFSMKL 834
            AQ VC   +KL +EP  +R++D+ +L +  D   G   +++A+ A++RSGG L+   +  
Sbjct: 44   AQFVCSFWRKLCREPMMWRNIDMHNLGDLCDL--GYDLEEMARHAVDRSGGQLLSICIDD 101

Query: 833  FGNDEILHHIAKKTSSLKCIRFAMCGQLSXXXXXXXXXXXXXXLRFSL----YTNEAIEA 666
            F  D +L++I  ++S ++ +R   C  +S              +   L    ++ E +EA
Sbjct: 102  FATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEA 161

Query: 665  VGCSCKHLKSVRLDGRGVKLP-IGIDEEEFNKLAFGIGKNMPQVRRLEIFRNSLTENGLQ 489
            +G  C  LKS RL+ +G + P I  DEE     A  I +NMP ++ L++F N LT NGL 
Sbjct: 162  IGQCCPRLKSFRLNCQGFRHPHIECDEE-----ALAIAQNMPGLKSLQLFGNKLTNNGLL 216

Query: 488  GILDGCRELEYLDLRHC 438
             ILDGC  LE LDLR C
Sbjct: 217  AILDGCCHLESLDLRQC 233



 Score = 24.3 bits (51), Expect(2) = 1e-24
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 420 DLMKVCADKINVLRSPMDE-DIGDFDWE 340
           +L K CA++I +LR P D  D  +FD E
Sbjct: 241 NLAKRCAEQIKILRYPNDSTDDYEFDAE 268


>ref|XP_002874853.1| hypothetical protein ARALYDRAFT_911822 [Arabidopsis lyrata subsp.
            lyrata] gi|297320690|gb|EFH51112.1| hypothetical protein
            ARALYDRAFT_911822 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  116 bits (290), Expect = 1e-23
 Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 3/201 (1%)
 Frame = -1

Query: 1013 AQLVCITCQKLSKEPQFFRSVDLRDLWNYVDWKSGDKKKKLAKEAINRSGGGLVEFSMKL 834
            AQ VC + +++ K+P  +R +D+R+   +     G    ++ + A++ S GGLVE +M  
Sbjct: 57   AQRVCRSWRRVCKDPSMWRKIDMRNNGIF-----GYDYDRMCRHAVDLSEGGLVEINMVH 111

Query: 833  FGNDEILHHIAKKTSSLKCIRFAMCGQLSXXXXXXXXXXXXXXLRFSL---YTNEAIEAV 663
            FGND +  +IA+++S+L+C+R AMC  L+                  +   Y    ++A+
Sbjct: 112  FGNDSLYSYIAERSSNLRCLRLAMCYPLTGKGFVSAVMQLSFLEELEISHGYAQLDLKAI 171

Query: 662  GCSCKHLKSVRLDGRGVKLPIGIDEEEFNKLAFGIGKNMPQVRRLEIFRNSLTENGLQGI 483
            G SC  LK+ +L+       +  D+E     A  I + MP +R LE+F N LT +GL+ I
Sbjct: 172  GQSCTLLKTFKLNRPSFSRYVKYDDE-----ALAIAETMPGLRYLELFGNGLTNSGLEAI 226

Query: 482  LDGCRELEYLDLRHCLCIWMM 420
            LD C  LE+LDLR C  I+++
Sbjct: 227  LDNCLHLEHLDLRRCFNIYLV 247


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 6/198 (3%)
 Frame = -1

Query: 1013 AQLVCITCQKLSKEPQFFRSVDLRDLWNY-VDWKSGDKKKKLAKEAINRSGGGLVEFSMK 837
            AQ VC   + +SKEP  +R++D+R+L +  +D+        +   AI+ S G L+  +++
Sbjct: 38   AQGVCSVWRAISKEPLLWRTIDMRNLGDIGLDFHL----LAMCHRAIDYSSGHLLHINVE 93

Query: 836  LFGNDEILHHIAKKTSSLKCIRFAMCGQLSXXXXXXXXXXXXXXLRFSL----YTNEAIE 669
             FG D++LHHI   TS+L+ +R A C Q+S                  +     T + +E
Sbjct: 94   YFGTDDLLHHITHSTSNLRSLRLACCYQISDEGLCEIAEKLPQLEELDISISNLTKDPLE 153

Query: 668  AVGCSCKHLKSVRLDGRGVKLP-IGIDEEEFNKLAFGIGKNMPQVRRLEIFRNSLTENGL 492
            A+G  C HLK+++ +  G + P I  DEE     AF I + MP +  L++F N LT  GL
Sbjct: 154  AIGQCCPHLKTLKFNMEGYRRPHIECDEE-----AFAIAETMPGLHHLQLFGNKLTNEGL 208

Query: 491  QGILDGCRELEYLDLRHC 438
              ILDGC  LE LDLR C
Sbjct: 209  LAILDGCPLLESLDLRQC 226


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 305

 Score =  115 bits (287), Expect = 2e-23
 Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
 Frame = -1

Query: 1013 AQLVCITCQKLSKEPQFFRSVDLRDLWNYVDWKSGDKKKKLAKEAINRSGGGLVEFSMKL 834
            AQ VC +   + K+P  +RSV++  L ++  W      + L + A++RS GGL+  S++ 
Sbjct: 43   AQFVCSSWNSVCKDPSMWRSVEIHPLCDF--WDLPFDLEALCRNAVDRSRGGLISISIEY 100

Query: 833  FGNDEILHHIAKKTSSLKCIRFAMCGQLSXXXXXXXXXXXXXXLRFSL----YTNEAIEA 666
            F  D ++ +IA ++S LK +R      LS                  +     + EA+  
Sbjct: 101  FATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISYCSLSTEALVG 160

Query: 665  VGCSCKHLKSVRLDGRGVKLPIGIDEEEFNKLAFGIGKNMPQVRRLEIFRNSLTENGLQG 486
            VG SC  L+S++L+ +G K P      E N+ A  IG+ MP +R L+IF N LT +G+Q 
Sbjct: 161  VGISCPLLRSLKLNCQGYKRP----HIESNEEALAIGQWMPHLRYLQIFGNKLTNDGVQA 216

Query: 485  ILDGCRELEYLDLRHC 438
            ILDGC  LE+LDLR C
Sbjct: 217  ILDGCPHLEFLDLRQC 232


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  114 bits (284), Expect = 5e-23
 Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
 Frame = -1

Query: 1013 AQLVCITCQKLSKEPQFFRSVDLRDLWNYVDWKSGDKKKKLAKEAINRSGGGLVEFSMKL 834
            AQ VC   + +SKEP  +R++D+R   N  D ++      +   AI+ S G L+  +++ 
Sbjct: 44   AQRVCSVWRGISKEPLLWRTIDMR---NSGDIETNFVFLAMCHRAIDYSSGHLLHINIEY 100

Query: 833  FGNDEILHHIAKKTSSLKCIRFAMCGQLSXXXXXXXXXXXXXXLRFSLY------TNEAI 672
            F  D++L HI   TS+L+ +R A C Q+S                  +       T + +
Sbjct: 101  FATDDLLRHITHSTSNLRSLRLACCYQISDEGLCEIAKELPQLEELDISISSFNPTRDPL 160

Query: 671  EAVGCSCKHLKSVRLDGRGVKLP-IGIDEEEFNKLAFGIGKNMPQVRRLEIFRNSLTENG 495
            EAVG  C+HLK+++ + +G + P I  DEE     AF I + MP +  L++F N LT  G
Sbjct: 161  EAVGRCCRHLKTLKFNMKGYRRPHIECDEE-----AFAIAETMPTLHHLQLFGNKLTNEG 215

Query: 494  LQGILDGCRELEYLDLRHC 438
            L  ILDGC  LE LDLR C
Sbjct: 216  LLAILDGCPHLESLDLRQC 234