BLASTX nr result

ID: Coptis24_contig00022266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022266
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234204.1| auxin efflux facilitator SlPIN7 [Solanum lyc...   264   5e-69
ref|NP_001234220.1| auxin efflux facilitator SlPIN9 [Solanum lyc...   264   6e-69
ref|XP_002282640.2| PREDICTED: probable auxin efflux carrier com...   261   5e-68
ref|XP_002282661.1| PREDICTED: probable auxin efflux carrier com...   261   5e-68
ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier com...   261   5e-68

>ref|NP_001234204.1| auxin efflux facilitator SlPIN7 [Solanum lycopersicum]
           gi|312983224|gb|ADR30408.1| auxin efflux facilitator
           SlPIN7 [Solanum lycopersicum]
          Length = 586

 Score =  264 bits (675), Expect = 5e-69
 Identities = 127/137 (92%), Positives = 135/137 (98%)
 Frame = +2

Query: 2   MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYKMNFRFIAADTLQKI 181
           MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFI+SNNPY MN+RFIAADTLQK+
Sbjct: 21  MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYAMNYRFIAADTLQKV 80

Query: 182 IVLIGLSIWSRVSARGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQ 361
           IVL+ L+IWSR+S+RGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASG+LMVQIVVLQ
Sbjct: 81  IVLVVLAIWSRISSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGSLMVQIVVLQ 140

Query: 362 CIIWYTLMLFLFEYRGA 412
           CIIWYTLMLFLFEYRGA
Sbjct: 141 CIIWYTLMLFLFEYRGA 157


>ref|NP_001234220.1| auxin efflux facilitator SlPIN9 [Solanum lycopersicum]
           gi|298286390|dbj|BAJ09454.1| auxin efflux carrier
           [Solanum lycopersicum] gi|312983222|gb|ADR30407.1| auxin
           efflux facilitator SlPIN9 [Solanum lycopersicum]
          Length = 594

 Score =  264 bits (674), Expect = 6e-69
 Identities = 129/137 (94%), Positives = 134/137 (97%)
 Frame = +2

Query: 2   MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYKMNFRFIAADTLQKI 181
           MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFI+SNNPY MN+RFIAADTLQKI
Sbjct: 21  MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYAMNYRFIAADTLQKI 80

Query: 182 IVLIGLSIWSRVSARGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQ 361
           IVL  L+IWSRVS+RGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASG+LMVQIVVLQ
Sbjct: 81  IVLFVLAIWSRVSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGSLMVQIVVLQ 140

Query: 362 CIIWYTLMLFLFEYRGA 412
           CIIWYTLMLFLFEYRGA
Sbjct: 141 CIIWYTLMLFLFEYRGA 157


>ref|XP_002282640.2| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           1 [Vitis vinifera]
          Length = 619

 Score =  261 bits (666), Expect = 5e-68
 Identities = 126/137 (91%), Positives = 133/137 (97%)
 Frame = +2

Query: 2   MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYKMNFRFIAADTLQKI 181
           MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS+NNPY MN+RFIAADTLQKI
Sbjct: 21  MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYRFIAADTLQKI 80

Query: 182 IVLIGLSIWSRVSARGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQ 361
           IVL+ L+IWSR S+RG LEWSITLFSLSTLPNTLVMGIPL+KGMYG+ASGTLMVQIVVLQ
Sbjct: 81  IVLVVLAIWSRTSSRGCLEWSITLFSLSTLPNTLVMGIPLMKGMYGEASGTLMVQIVVLQ 140

Query: 362 CIIWYTLMLFLFEYRGA 412
           CIIWYTLMLFLFEYRGA
Sbjct: 141 CIIWYTLMLFLFEYRGA 157


>ref|XP_002282661.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           3 [Vitis vinifera]
          Length = 604

 Score =  261 bits (666), Expect = 5e-68
 Identities = 126/137 (91%), Positives = 133/137 (97%)
 Frame = +2

Query: 2   MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYKMNFRFIAADTLQKI 181
           MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS+NNPY MN+RFIAADTLQKI
Sbjct: 21  MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYRFIAADTLQKI 80

Query: 182 IVLIGLSIWSRVSARGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQ 361
           IVL+ L+IWSR S+RG LEWSITLFSLSTLPNTLVMGIPL+KGMYG+ASGTLMVQIVVLQ
Sbjct: 81  IVLVVLAIWSRTSSRGCLEWSITLFSLSTLPNTLVMGIPLMKGMYGEASGTLMVQIVVLQ 140

Query: 362 CIIWYTLMLFLFEYRGA 412
           CIIWYTLMLFLFEYRGA
Sbjct: 141 CIIWYTLMLFLFEYRGA 157


>ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           2 [Vitis vinifera]
          Length = 597

 Score =  261 bits (666), Expect = 5e-68
 Identities = 126/137 (91%), Positives = 133/137 (97%)
 Frame = +2

Query: 2   MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYKMNFRFIAADTLQKI 181
           MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS+NNPY MN+RFIAADTLQKI
Sbjct: 21  MILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYRFIAADTLQKI 80

Query: 182 IVLIGLSIWSRVSARGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQ 361
           IVL+ L+IWSR S+RG LEWSITLFSLSTLPNTLVMGIPL+KGMYG+ASGTLMVQIVVLQ
Sbjct: 81  IVLVVLAIWSRTSSRGCLEWSITLFSLSTLPNTLVMGIPLMKGMYGEASGTLMVQIVVLQ 140

Query: 362 CIIWYTLMLFLFEYRGA 412
           CIIWYTLMLFLFEYRGA
Sbjct: 141 CIIWYTLMLFLFEYRGA 157


Top