BLASTX nr result

ID: Coptis24_contig00022258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022258
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258...   187   2e-45
gb|AFK36269.1| unknown [Lotus japonicus]                              186   4e-45
ref|XP_003551879.1| PREDICTED: uncharacterized protein LOC100789...   186   7e-45
ref|XP_004152928.1| PREDICTED: uncharacterized protein LOC101214...   181   2e-43
ref|NP_001242491.1| uncharacterized protein LOC100786583 [Glycin...   180   3e-43

>ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258888 [Vitis vinifera]
           gi|297737442|emb|CBI26643.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  187 bits (476), Expect = 2e-45
 Identities = 98/186 (52%), Positives = 120/186 (64%)
 Frame = +3

Query: 6   MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 185
           MSKL SRIAG FSS+T  G DK GN+YF RK ++DG +KEKRWV+FKGE+DPTS+PVEWI
Sbjct: 1   MSKLLSRIAGFFSSRTMVGADKVGNRYFIRKEEVDGIMKEKRWVVFKGEKDPTSIPVEWI 60

Query: 186 CWLNGQRKIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRQRMRTGKVGGPD 365
           CWLNGQRK+APTP                               GS+R+ ++TGKVGGPD
Sbjct: 61  CWLNGQRKVAPTP-EEMIELEARRERVRLNVALLKEEEERKAKEGSTRKVVKTGKVGGPD 119

Query: 366 LKSFIQQYPTASSKGDGQEEGVVDGSTGRYRNSIQTEEEKLTTEHPESLEPTGSGASFKP 545
           LKSFI+Q+P A+S+GD  EE     +    RN  +T          ++ EPTG+GASFKP
Sbjct: 120 LKSFIRQFP-AASEGDKMEE--ASDAMDDMRNPKET----------DTTEPTGTGASFKP 166

Query: 546 GTWQPP 563
           GTWQPP
Sbjct: 167 GTWQPP 172


>gb|AFK36269.1| unknown [Lotus japonicus]
          Length = 183

 Score =  186 bits (473), Expect = 4e-45
 Identities = 99/188 (52%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
 Frame = +3

Query: 6   MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 185
           M ++F RIAGLFS++ F GVDKAGNKYFTRK  IDG++KEKRWVIFKGEEDPTS+PVEWI
Sbjct: 1   MRRVFGRIAGLFSNRNFEGVDKAGNKYFTRKEQIDGSMKEKRWVIFKGEEDPTSIPVEWI 60

Query: 186 CWLNGQRKIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRQRMRTGKVGGPD 365
            WLNGQRK APTP                               GS+ +R+ TGKV GPD
Sbjct: 61  SWLNGQRKKAPTPEEMMELEARREQVRQNVALLKKEEEERKAKEGSTGKRVSTGKVSGPD 120

Query: 366 LKSFIQQY--PTASSKGDGQEEGVVDGSTGRYRNSIQTEEEKLTTEHPESLEPTGSGASF 539
           LKSF+QQ   P+   K + +  G +DG      N+ + E+ +L     ES EPTGSG SF
Sbjct: 121 LKSFVQQLRDPSEGVKVE-ESSGAMDGLRDSQDNAGEKEKVEL-----ESSEPTGSGPSF 174

Query: 540 KPGTWQPP 563
           +PGTWQPP
Sbjct: 175 RPGTWQPP 182


>ref|XP_003551879.1| PREDICTED: uncharacterized protein LOC100789832 [Glycine max]
          Length = 183

 Score =  186 bits (471), Expect = 7e-45
 Identities = 96/186 (51%), Positives = 115/186 (61%)
 Frame = +3

Query: 6   MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 185
           M +L  +I+G  S++T  GVDK GNKYFTR  ++DG +KEKRWVIFKGEEDPTS+PVEWI
Sbjct: 1   MRRLLGKISGFLSNRTMVGVDKTGNKYFTRNEEVDGIVKEKRWVIFKGEEDPTSIPVEWI 60

Query: 186 CWLNGQRKIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRQRMRTGKVGGPD 365
           CWLNGQRK APTP                               GS  +R+ TGKV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERITKEGSKGKRVSTGKVSGPD 120

Query: 366 LKSFIQQYPTASSKGDGQEEGVVDGSTGRYRNSIQTEEEKLTTEHPESLEPTGSGASFKP 545
           LKSFIQQ P +S   +G+E      + G  RN  ++  EK   +  ES EPTGSGASF+P
Sbjct: 121 LKSFIQQLPVSS---EGKEVEEPPSAMGGLRNPQESLAEK-EKDESESSEPTGSGASFRP 176

Query: 546 GTWQPP 563
           GTWQPP
Sbjct: 177 GTWQPP 182


>ref|XP_004152928.1| PREDICTED: uncharacterized protein LOC101214441 [Cucumis sativus]
          Length = 183

 Score =  181 bits (458), Expect = 2e-43
 Identities = 95/186 (51%), Positives = 116/186 (62%)
 Frame = +3

Query: 6   MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 185
           MSKLF +IA  FS++T  GVDKAGN+YF  K +IDG +KEKRWV+FKGE+DPTS+PVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 186 CWLNGQRKIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRQRMRTGKVGGPD 365
           CWLNGQRK APTP                               G+ R+ + TG+V GPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 366 LKSFIQQYPTASSKGDGQEEGVVDGSTGRYRNSIQTEEEKLTTEHPESLEPTGSGASFKP 545
           LKSFI+Q PT  S+G    EG+    + R  N  + ++EK     PES EP GSG +FKP
Sbjct: 121 LKSFIRQVPT-GSEGAQDVEGLPTRDSLRNSNEKEADQEK---PIPESSEPVGSGHTFKP 176

Query: 546 GTWQPP 563
           GTWQPP
Sbjct: 177 GTWQPP 182


>ref|NP_001242491.1| uncharacterized protein LOC100786583 [Glycine max]
           gi|255640704|gb|ACU20636.1| unknown [Glycine max]
          Length = 182

 Score =  180 bits (457), Expect = 3e-43
 Identities = 96/186 (51%), Positives = 113/186 (60%)
 Frame = +3

Query: 6   MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 185
           M +L  +I+G  S++T  GVDK GNKYFTR  ++DG +KEKRWVIFKGEEDPTS+PVEWI
Sbjct: 1   MRRLLGKISGFLSNRTTVGVDKTGNKYFTRNEEVDGIMKEKRWVIFKGEEDPTSIPVEWI 60

Query: 186 CWLNGQRKIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRQRMRTGKVGGPD 365
           CWLNGQRK APTP                               GS  +R+ TGKV GPD
Sbjct: 61  CWLNGQRKKAPTP-EEMMELEARRECVRQNVALLKKEEERIAKEGSKGKRVSTGKVSGPD 119

Query: 366 LKSFIQQYPTASSKGDGQEEGVVDGSTGRYRNSIQTEEEKLTTEHPESLEPTGSGASFKP 545
           LKSFIQQ+P  S   +G+E G    +    RN      EK   +  ES EPTGSGASF+P
Sbjct: 120 LKSFIQQFPVPS---EGKEVGESPSAMDGLRNPQDGLAEK-EKDESESSEPTGSGASFRP 175

Query: 546 GTWQPP 563
           GTWQPP
Sbjct: 176 GTWQPP 181


Top