BLASTX nr result

ID: Coptis24_contig00022257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022257
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinife...   132   4e-29
ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002523565.1| conserved hypothetical protein [Ricinus comm...   119   4e-25
ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259...   118   7e-25
gb|AFK37699.1| unknown [Lotus japonicus]                              110   1e-22

>emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinifera]
           gi|296082431|emb|CBI21436.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  132 bits (332), Expect = 4e-29
 Identities = 84/170 (49%), Positives = 103/170 (60%), Gaps = 12/170 (7%)
 Frame = -3

Query: 552 ACLDMFNNEHQN--GRLAPRISFSNDFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMM 379
           ACLDM+N+EH+     ++PRISFSNDF ++QQ +I HE+ +     SSDFEFSV+NY+MM
Sbjct: 2   ACLDMYNSEHKGLCAPMSPRISFSNDFVESQQ-MIKHERSSREAPVSSDFEFSVTNYSMM 60

Query: 378 AADELFSKGRLLPFKDNCTNQFQPKMTXXXXXXXXXXXXRMAXXXXXXXXXXXXXSRWKE 199
           +ADELF KGRLLPFKDNCTN  Q K T             +              +RWK 
Sbjct: 61  SADELFFKGRLLPFKDNCTNHSQ-KTTLREELL-------VVDEEEVSRRPPKGSTRWKG 112

Query: 198 LLGLKRNNHIVSKKADK---------RSMVHEEEAHTSK-SSQEMLTEEG 79
           LLGLKR  HI SKK DK         RS++  EEAH  K S+QEML + G
Sbjct: 113 LLGLKRT-HIGSKKTDKTDGPMVEGKRSVLVHEEAHVGKTSTQEMLNDGG 161


>ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|222853053|gb|EEE90600.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  124 bits (312), Expect = 8e-27
 Identities = 81/174 (46%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
 Frame = -3

Query: 552 ACLDMFNNEHQNG--RLAPRISFSNDFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMM 379
           ACLDM+N+EH+     ++PRISFSNDF D+QQ I+  E+ +  T  S+DFEFSV+NY+MM
Sbjct: 2   ACLDMYNSEHKGHCPPMSPRISFSNDFVDSQQ-IMKQERSSRETPVSTDFEFSVTNYSMM 60

Query: 378 AADELFSKGRLLPFKDNCTNQFQPKMTXXXXXXXXXXXXRMAXXXXXXXXXXXXXSRWKE 199
           +ADELF KGRLLPFKDN +NQ Q  +                             +RWK 
Sbjct: 61  SADELFFKGRLLPFKDNGSNQMQRTIRDELLVDDD-------EGDEVSPRPPKGSTRWKG 113

Query: 198 LLGLKRNNHIVSKKADK--------------RSMVHEEEAHTSKSSQEMLTEEG 79
           LLGLKR +HI SKK DK                 VHEE  H SKSSQE+++E G
Sbjct: 114 LLGLKR-SHIGSKKVDKSEGSMERSVGESRRSGFVHEEVQH-SKSSQEIVSEGG 165


>ref|XP_002523565.1| conserved hypothetical protein [Ricinus communis]
           gi|223537127|gb|EEF38760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  119 bits (297), Expect = 4e-25
 Identities = 81/177 (45%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
 Frame = -3

Query: 552 ACLDMFNNEHQNGR---LAPRISFSNDFADTQQQIINHEKRTPTTS---TSSDFEFSVSN 391
           ACLDM+N+EHQ      ++PRISFSNDFAD+QQ II  E+ + + S    S+DFEFSV+N
Sbjct: 2   ACLDMYNSEHQGQYCPPISPRISFSNDFADSQQ-IIKQERSSSSRSEAPVSTDFEFSVTN 60

Query: 390 YNMMAADELFSKGRLLPFKDNCTNQFQPKMTXXXXXXXXXXXXRMAXXXXXXXXXXXXXS 211
           Y+MM+ADELF KGRLLPFKDN  N    +M                             +
Sbjct: 61  YSMMSADELFFKGRLLPFKDNGNNNKSNQMQRTIRDELLVDDDD-GYHGVSHRPPKGSST 119

Query: 210 RWKELLGLKRNNHIVSKKADKRSM-------------VHEEEAHTSKSSQEMLTEEG 79
           RWK LLGLKR +HI SKK DK S                 EE    KSSQE+L+E G
Sbjct: 120 RWKGLLGLKR-SHIGSKKVDKSSCDGSFGFDQNRRLGFAHEEMDVGKSSQELLSEGG 175


>ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259450 [Vitis vinifera]
          Length = 154

 Score =  118 bits (295), Expect = 7e-25
 Identities = 76/154 (49%), Positives = 92/154 (59%), Gaps = 10/154 (6%)
 Frame = -3

Query: 510 LAPRISFSNDFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMMAADELFSKGRLLPFKD 331
           ++PRISFSNDF ++QQ +I HE+ +     SSDFEFSV+NY+MM+ADELF KGRLLPFKD
Sbjct: 1   MSPRISFSNDFVESQQ-MIKHERSSREAPVSSDFEFSVTNYSMMSADELFFKGRLLPFKD 59

Query: 330 NCTNQFQPKMTXXXXXXXXXXXXRMAXXXXXXXXXXXXXSRWKELLGLKRNNHIVSKKAD 151
           NCTN  Q K T             +              +RWK LLGLKR  HI SKK D
Sbjct: 60  NCTNHSQ-KTTLREELL-------VVDEEEVSRRPPKGSTRWKGLLGLKRT-HIGSKKTD 110

Query: 150 K---------RSMVHEEEAHTSK-SSQEMLTEEG 79
           K         RS++  EEAH  K S+QEML + G
Sbjct: 111 KTDGPMVEGKRSVLVHEEAHVGKTSTQEMLNDGG 144


>gb|AFK37699.1| unknown [Lotus japonicus]
          Length = 176

 Score =  110 bits (276), Expect = 1e-22
 Identities = 71/169 (42%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
 Frame = -3

Query: 552 ACLDMFNNEHQNGR---LAPRISFSNDFADTQQQIINHEKRTPTTS---TSSDFEFSVSN 391
           ACLDM+N+E + G    ++PRISFSNDF D QQ +         TS    SSDFEFS +N
Sbjct: 2   ACLDMYNSERKQGHHHPMSPRISFSNDFVDVQQALKQERNSRSDTSLPVVSSDFEFSTTN 61

Query: 390 YNMMAADELFSKGRLLPFKDNCTNQFQPKMTXXXXXXXXXXXXRMAXXXXXXXXXXXXXS 211
           Y+MM+ADELFSKGRLLP+KD+C N  Q +               +               
Sbjct: 62  YSMMSADELFSKGRLLPYKDSCNNHNQMQRATTTLKEEL-----LNNDDEYNFSRRPPKG 116

Query: 210 RWKELLGLKRNNHIVSKKADKRSMVHEEEAHTSK-------SSQEMLTE 85
           RWK LLGLK+  HI SKK ++     +  A T +       +SQEML E
Sbjct: 117 RWKGLLGLKK-YHIGSKKVERSEGSSDRGAETRRLASPHNITSQEMLNE 164


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