BLASTX nr result

ID: Coptis24_contig00022245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022245
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|222859724|gb|EEE97271.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/119 (32%), Positives = 57/119 (47%)
 Frame = -3

Query: 507 KEAEEPSSCFFYNLQIVKITSFRGSDTEMKMVKFFLDKAIVLESLVLVVASDFHLEKDID 328
           +++ +  S  F  L+ +K+  F+    E+ +VKFFL++AI LE LVLV     H      
Sbjct: 397 RQSFQKYSASFDCLKFIKLPGFKFQKDELMLVKFFLERAIFLEKLVLVTPKSRHARVLTP 456

Query: 327 NIKDGDGVASQSENCNVPLRILHDQLLKLPKASTDAQILLFEHWEVDTSLCPKHKHAAY 151
           N++                   + Q L+  KAS  AQI +FEH   DTS+CP H    Y
Sbjct: 457 NLQ------------------AYYQYLQSWKASPGAQIAVFEHLN-DTSVCPMHSKTWY 496


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