BLASTX nr result

ID: Coptis24_contig00022230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022230
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001170478.1| LOC100384476 [Zea mays] gi|226701022|gb|ACO7...    57   3e-09
ref|XP_002446994.1| hypothetical protein SORBIDRAFT_06g026530 [S...    57   3e-09
ref|NP_001105307.1| Calcium-dependent protein kinase [Zea mays] ...    57   3e-09
gb|ACN29183.1| unknown [Zea mays] gi|414585732|tpg|DAA36303.1| T...    57   3e-09
gb|ACR37715.1| unknown [Zea mays]                                      57   3e-09

>ref|NP_001170478.1| LOC100384476 [Zea mays] gi|226701022|gb|ACO72987.1| CDPK protein
           [Zea mays] gi|413919147|gb|AFW59079.1| putative
           calcium-dependent protein kinase family protein [Zea
           mays]
          Length = 556

 Score = 57.0 bits (136), Expect(3) = 3e-09
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 323 LGDIISEVDQDNDGRIDYGEFVAMMTKGN 237
           L D+I+E DQDNDGRIDYGEFVAMMTKGN
Sbjct: 505 LDDVINEADQDNDGRIDYGEFVAMMTKGN 533



 Score = 26.6 bits (57), Expect(3) = 3e-09
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 246 KGK*GVGRLTVRNSLN 199
           KG  GVGR T+RNSLN
Sbjct: 531 KGNMGVGRRTMRNSLN 546



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 196 VNISMRDIPRAF 161
           +NISMRD P AF
Sbjct: 545 LNISMRDAPGAF 556


>ref|XP_002446994.1| hypothetical protein SORBIDRAFT_06g026530 [Sorghum bicolor]
           gi|241938177|gb|EES11322.1| hypothetical protein
           SORBIDRAFT_06g026530 [Sorghum bicolor]
          Length = 555

 Score = 57.0 bits (136), Expect(3) = 3e-09
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 323 LGDIISEVDQDNDGRIDYGEFVAMMTKGN 237
           L D+I+E DQDNDGRIDYGEFVAMMTKGN
Sbjct: 504 LDDVINEADQDNDGRIDYGEFVAMMTKGN 532



 Score = 26.6 bits (57), Expect(3) = 3e-09
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 246 KGK*GVGRLTVRNSLN 199
           KG  GVGR T+RNSLN
Sbjct: 530 KGNMGVGRRTMRNSLN 545



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 196 VNISMRDIPRAF 161
           +NISMRD P AF
Sbjct: 544 LNISMRDAPGAF 555


>ref|NP_001105307.1| Calcium-dependent protein kinase [Zea mays]
           gi|1504052|dbj|BAA13232.1| calcium-dependent protein
           kinase [Zea mays]
          Length = 554

 Score = 57.0 bits (136), Expect(3) = 3e-09
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 323 LGDIISEVDQDNDGRIDYGEFVAMMTKGN 237
           L D+I+E DQDNDGRIDYGEFVAMMTKGN
Sbjct: 503 LDDVINEADQDNDGRIDYGEFVAMMTKGN 531



 Score = 26.6 bits (57), Expect(3) = 3e-09
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 246 KGK*GVGRLTVRNSLN 199
           KG  GVGR T+RNSLN
Sbjct: 529 KGNMGVGRRTMRNSLN 544



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 196 VNISMRDIPRAF 161
           +NISMRD P AF
Sbjct: 543 LNISMRDAPGAF 554


>gb|ACN29183.1| unknown [Zea mays] gi|414585732|tpg|DAA36303.1| TPA: putative
           calcium-dependent protein kinase family protein [Zea
           mays]
          Length = 547

 Score = 57.0 bits (136), Expect(3) = 3e-09
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 323 LGDIISEVDQDNDGRIDYGEFVAMMTKGN 237
           L D+I+E DQDNDGRIDYGEFVAMMTKGN
Sbjct: 496 LDDVINEADQDNDGRIDYGEFVAMMTKGN 524



 Score = 26.6 bits (57), Expect(3) = 3e-09
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 246 KGK*GVGRLTVRNSLN 199
           KG  GVGR T+RNSLN
Sbjct: 522 KGNMGVGRRTMRNSLN 537



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 196 VNISMRDIPRAF 161
           +NISMRD P AF
Sbjct: 536 LNISMRDAPGAF 547


>gb|ACR37715.1| unknown [Zea mays]
          Length = 226

 Score = 57.0 bits (136), Expect(3) = 3e-09
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 323 LGDIISEVDQDNDGRIDYGEFVAMMTKGN 237
           L D+I+E DQDNDGRIDYGEFVAMMTKGN
Sbjct: 175 LDDVINEADQDNDGRIDYGEFVAMMTKGN 203



 Score = 26.6 bits (57), Expect(3) = 3e-09
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 246 KGK*GVGRLTVRNSLN 199
           KG  GVGR T+RNSLN
Sbjct: 201 KGNMGVGRRTMRNSLN 216



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 196 VNISMRDIPRAF 161
           +NISMRD P AF
Sbjct: 215 LNISMRDAPGAF 226


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