BLASTX nr result

ID: Coptis24_contig00022218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022218
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511084.1| conserved hypothetical protein [Ricinus comm...   111   1e-22
ref|XP_002318782.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]                         105   8e-21
emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]    82   9e-14
ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana] ...    63   6e-08

>ref|XP_002511084.1| conserved hypothetical protein [Ricinus communis]
           gi|223550199|gb|EEF51686.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score =  111 bits (278), Expect = 1e-22
 Identities = 76/213 (35%), Positives = 117/213 (54%)
 Frame = +2

Query: 11  LVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAEMASGALIRL 190
           ++ ++KLL+  F +V++ L SV+ GVE+L+ +L+ +MC P+++YVK LK +M +G  +RL
Sbjct: 225 ILVTVKLLQHVFNNVNAVLSSVEGGVEDLVQDLASKMCNPMVEYVKGLKDDMKNGTCVRL 284

Query: 191 VAMVEEMKGVVRDGQXXXXXXXXXXXXXXXXXXXALSRLKDAEEKRRAMKEFGGYLLEAK 370
           + +VEEM+ V+RDG+                   ALS+LK  E++ R MKE    L +A+
Sbjct: 285 LTIVEEMEIVMRDGKRELEDARKKVRVAEKGKTEALSKLKLIEDRVRRMKEHLS-LPQAE 343

Query: 371 KISKEPVTPRKFLVMEEDDAGEEXXXXXXXXXXXXXQAQASPFVALGLLQAESNNKIRRH 550
           +   EP+TP K L MEE+   +E             + QASP    GLL  +S +   RH
Sbjct: 344 RGLIEPLTPHKLLGMEEEQVKDE--KLLWKLLKKKRKYQASPMGPEGLLCFDSYD---RH 398

Query: 551 RGDIKNSAKIKPMVNHRPVTRSSTKGYSPGTPC 649
                 SA  KP ++HR   R+  +   P TPC
Sbjct: 399 ----GKSAGAKPPLDHRRAKRNCPRELVPQTPC 427


>ref|XP_002318782.1| predicted protein [Populus trichocarpa] gi|222859455|gb|EEE97002.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  108 bits (269), Expect = 1e-21
 Identities = 68/211 (32%), Positives = 107/211 (50%)
 Frame = +2

Query: 14  VASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAEMASGALIRLV 193
           V +++LL+    HV++ L SV DGV++LI  LS++MC P+++Y K LK +M +GA +RL+
Sbjct: 195 VITVRLLQTISHHVTTVLRSVMDGVDDLIQGLSQQMCNPMLEYAKGLKDDMKNGACMRLL 254

Query: 194 AMVEEMKGVVRDGQXXXXXXXXXXXXXXXXXXXALSRLKDAEEKRRAMKEFGGYLLEAKK 373
           AM ++M+ V++D +                   AL +LK+  E+ R +KE    L EAK+
Sbjct: 255 AMADKMEKVMKDSRVELEDARKKARLAEERKIEALCKLKETVERVRKLKEHVTSLSEAKR 314

Query: 374 ISKEPVTPRKFLVMEEDDAGEEXXXXXXXXXXXXXQAQASPFVALGLLQAESNNKIRRHR 553
             ++     KF  MEED   ++             +   SP     LL   +     + +
Sbjct: 315 GLRDSSFSEKFSDMEEDRTKDDKLLWGILKKKRKCKVPESPLGPEMLLYFGATKDNHKPK 374

Query: 554 GDIKNSAKIKPMVNHRPVTRSSTKGYSPGTP 646
           G       ++P+ NHRP  RS T G SP TP
Sbjct: 375 G-------VRPLSNHRPARRSCTAGLSPKTP 398


>dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]
          Length = 430

 Score =  105 bits (262), Expect = 8e-21
 Identities = 72/210 (34%), Positives = 107/210 (50%)
 Frame = +2

Query: 14  VASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAEMASGALIRLV 193
           + +L LL+  F +V + L SV+ GV NL+ EL+++MC P+++YVK LK +M +G  +RL+
Sbjct: 203 LTTLNLLQVMFNNVDAILGSVEGGVNNLMQELAEKMCNPMVEYVKSLKDDMKNGTCVRLL 262

Query: 194 AMVEEMKGVVRDGQXXXXXXXXXXXXXXXXXXXALSRLKDAEEKRRAMKEFGGYLLEAKK 373
           AMVEEM+ ++ +G+                   A+ +LK  EE  R M+  G + L    
Sbjct: 263 AMVEEMERMISNGRLELEDARKKVRVAEEGKIEAVCKLKTIEE--RVMRMRGHFSLPEAG 320

Query: 374 ISKEPVTPRKFLVMEEDDAGEEXXXXXXXXXXXXXQAQASPFVALGLLQAESNNKIRRHR 553
            + EP TP KFL ME   A +E             +A ASP    GLL  + NN   RH 
Sbjct: 321 FT-EPSTPHKFLGMEGKQAKDEKLLWNLLKKKRKHKALASPMGPEGLLCFDGNN---RH- 375

Query: 554 GDIKNSAKIKPMVNHRPVTRSSTKGYSPGT 643
                   ++  ++HR +TR   KG  P T
Sbjct: 376 ---PKLVDMRLSLDHRQITRGCRKGLGPRT 402


>emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]
          Length = 413

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 51/131 (38%), Positives = 75/131 (57%)
 Frame = +2

Query: 11  LVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAEMASGALIRL 190
           L+  L + + T   V +AL +V+ GVE+L+ +L+++MC PL++YVK LK E   G   RL
Sbjct: 98  LLFVLNVFQITLRQVDAALNAVESGVEDLMQQLAQQMCNPLVEYVKRLKTETTLGTFARL 157

Query: 191 VAMVEEMKGVVRDGQXXXXXXXXXXXXXXXXXXXALSRLKDAEEKRRAMKEFGGYLLEAK 370
           +AMVEEM+  +RDG+                   AL+RL + E++ R MKE  G LLE +
Sbjct: 158 LAMVEEMEREIRDGRVELEEERMKVRVAEKKMLEALTRLTELEDRER-MKEQLGSLLETR 216

Query: 371 KISKEPVTPRK 403
           K     + PRK
Sbjct: 217 K--SYTLRPRK 225


>ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|63003874|gb|AAY25466.1| At5g61865 [Arabidopsis
           thaliana] gi|109946451|gb|ABG48404.1| At5g61865
           [Arabidopsis thaliana] gi|332010143|gb|AED97526.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 417

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
 Frame = +2

Query: 20  SLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAEMASGALIRLVAM 199
           ++KLLR  F +++  L SV  GV + +  L+K MC P+  YV +L AE+  G  ++L+ +
Sbjct: 203 TVKLLRVLFNNINEVLGSVDTGVNDFMQALAKNMCHPMTKYVGNLAAEIKHGPCVQLMNV 262

Query: 200 VEEMKGVVRDGQXXXXXXXXXXXXXXXXXXXALSRLKDAEEKRRAMKEFGGYLLEA--KK 373
           V EM+    D +                   ALS+LK AE++ + M     +LL A  KK
Sbjct: 263 VNEMERSNSDTRRELQDARERIRLAEETKINALSKLKKAEDQVQRMTTSAKFLLPASQKK 322

Query: 374 ISKEPVTPRK 403
            ++  +T ++
Sbjct: 323 QAEHSITGKR 332


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