BLASTX nr result

ID: Coptis24_contig00022204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022204
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]    65   4e-09
emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]    61   8e-08
emb|CBI32504.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002510290.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
sp|Q851V5.1|Y3216_ORYSJ RecName: Full=Putative B3 domain-contain...    57   2e-06

>emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]
          Length = 765

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -3

Query: 345 RLCRIEVKKVE-DNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEER 169
           + C +E+K+VE D F  NGWQ FV+ HS+  G+FLVF+Y   + F+V ++  +GC K+E 
Sbjct: 515 KYCHVELKEVEKDVFIKNGWQEFVRGHSVEQGDFLVFRYHGKALFDVSIFGRNGCRKDES 574

Query: 168 S 166
           S
Sbjct: 575 S 575



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = -3

Query: 306 FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKE----ERSYENMYKSSY 139
           FF  GW  FV+ + L LG+FLVF Y  NS FEV++Y    CEKE      S +  +    
Sbjct: 132 FFEKGWGKFVQDNFLELGDFLVFHYVGNSKFEVIIYGKHCCEKELLAATASNDEPHSKG- 190

Query: 138 FVKEREEKNDAEEAGRGASKT 76
              ER+E    E   RG S T
Sbjct: 191 --DERQENAKRENGERGESGT 209


>emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]
          Length = 844

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
 Frame = -3

Query: 357 DSLERLCRIEVKKV-EDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           D + R+ ++E+ K+ +D +F  GWQ FV  + + + +FLVF+YD    F+  L+ ++GCE
Sbjct: 509 DPVGRVWQVELSKIGKDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCE 568

Query: 180 KE--ERSYENMYKSSYFVKE----REEKNDAEE 100
           K+  E     +YK  + V E     EEK++ EE
Sbjct: 569 KKGSEEINVGIYKRCFCVNEEKDVEEEKSNEEE 601



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = -3

Query: 357 DSLERLCRIEVKKVEDN-FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           D + R+  +EV  +  N +F NGWQ F+  +S+  G+FLVF+Y  N  F+  L   + CE
Sbjct: 140 DFVGRVWHVEVGPIGKNVYFLNGWQQFLTENSVEEGDFLVFRYAGNCIFDFKLLGRTECE 199

Query: 180 KEERSYENM--YKSSYFVKERE-EKNDAEE 100
           K++    +M  YK  + VKE++ E+ + EE
Sbjct: 200 KKDTKVVDMDIYKKDFCVKEKDVEEAEGEE 229


>emb|CBI32504.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = -3

Query: 357 DSLERLCRIEVKKVEDN-FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           D + R+  +EV  +  N +F NGWQ F+  +S+  G+FLVF+Y  N  F+  L   + CE
Sbjct: 372 DFVGRVWHVEVGPIGKNVYFLNGWQQFLTENSVEEGDFLVFRYAGNCIFDFKLLGRTECE 431

Query: 180 KEERSYENM--YKSSYFVKERE-EKNDAEE 100
           K++    +M  YK  + VKE++ E+ + EE
Sbjct: 432 KKDTKVVDMDIYKKDFCVKEKDVEEAEGEE 461



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = -3

Query: 357 DSLERLCRIEVKKV-EDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           D + R+ ++E+ K+ +D +F  GWQ FV  + + + +FLVF+YD    F+  L+ ++GCE
Sbjct: 701 DPVGRVWQVELSKIGKDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCE 760

Query: 180 KE--ERSYENMYKSSYF 136
           K+  E     +YK  +F
Sbjct: 761 KKGSEEINVGIYKRCFF 777



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
 Frame = -3

Query: 357 DSLERLCRIEVKKVEDN-FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           DS+ R+  +EV ++  N +F  GWQ F+  + +  G+  VF+YD +  F+  LY  +GC+
Sbjct: 85  DSVGRVWHVEVGQIGKNVYFLKGWQQFLTDNLVEEGDLFVFQYDGSYIFDFKLYGTTGCQ 144

Query: 180 KEERSYE-NMYKSSYFVK-----EREEKNDAEE 100
           K++     ++ K  +FVK     E  E+N+ EE
Sbjct: 145 KKDSEVNVDVNKKKFFVKGEEDVEEVERNEEEE 177


>ref|XP_002510290.1| conserved hypothetical protein [Ricinus communis]
           gi|223550991|gb|EEF52477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -3

Query: 354 SLERLCRIEVKKVEDN--FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCE 181
           S +R   I+V K  D   +F  GW+ FVK H L+LG+F+VF+Y+ +  F+ ++++ S CE
Sbjct: 51  SSDREWHIKVGKCCDGSLYFEEGWEDFVKHHGLNLGDFVVFEYNGDLVFDAIVFDSSACE 110

Query: 180 KE 175
           KE
Sbjct: 111 KE 112


>sp|Q851V5.1|Y3216_ORYSJ RecName: Full=Putative B3 domain-containing protein Os03g0621600
           gi|28201553|gb|AAO34491.1| putative auxin response
           factor [Oryza sativa Japonica Group]
           gi|108709878|gb|ABF97673.1| B3 DNA binding domain
           containing protein [Oryza sativa Japonica Group]
          Length = 1029

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -3

Query: 324 KKVEDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEER-SYENM-- 154
           KK+      +GW+ FV +H L++G+FLVFKY+ +   +VL+++ SGCEK    S EN   
Sbjct: 499 KKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAID 558

Query: 153 YKSSYFVKEREEKNDAEEAGRGASKTV*KNYSRVGKKIGKS 31
           +    + +  +      +  +G    + K+ S  G KIG +
Sbjct: 559 HVGQGWKEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNT 599


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