BLASTX nr result

ID: Coptis24_contig00022185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022185
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31923.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_002266497.1| PREDICTED: sec14 cytosolic factor-like [Viti...   265   4e-69
ref|XP_002528928.1| Sec14 cytosolic factor, putative [Ricinus co...   265   4e-69
ref|XP_002304272.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-67
ref|XP_002326637.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-66

>emb|CBI31923.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  265 bits (676), Expect = 4e-69
 Identities = 123/160 (76%), Positives = 145/160 (90%)
 Frame = +2

Query: 2    VDLNRLLQVTTIDRFLKYHIAEQEKTLNVRYPACSVAAKKHVASITSILDVKGVGMNNFS 181
            VDLN LLQ+TTI+RF+KYH++EQEKTL +R+PACSVAAK+H+AS TSI+DVKGVG++NFS
Sbjct: 537  VDLNALLQLTTIERFVKYHVSEQEKTLKLRFPACSVAAKRHIASSTSIIDVKGVGVSNFS 596

Query: 182  KPARELFMEIQRIDSNNYPETLHRLFIVNAGSGFRVLWKALKAFLDPRTLAKIQVLGSNF 361
            +PAR LFMEIQ+IDSN YPETL+RLFIVNAGSGFR LWKA+KAFLD RT+AKI+VLGSN+
Sbjct: 597  RPARHLFMEIQKIDSNYYPETLNRLFIVNAGSGFRALWKAIKAFLDARTIAKIEVLGSNY 656

Query: 362  QNNLFEVIDPSTLPSFLGGYCACSEFGGCLLTDKGPWNDP 481
            Q+NL E IDPS LPSFL G C CS +GGCL +DKGPWNDP
Sbjct: 657  QSNLVEFIDPSNLPSFLCGNCTCSGYGGCLFSDKGPWNDP 696


>ref|XP_002266497.1| PREDICTED: sec14 cytosolic factor-like [Vitis vinifera]
          Length = 389

 Score =  265 bits (676), Expect = 4e-69
 Identities = 123/160 (76%), Positives = 145/160 (90%)
 Frame = +2

Query: 2   VDLNRLLQVTTIDRFLKYHIAEQEKTLNVRYPACSVAAKKHVASITSILDVKGVGMNNFS 181
           VDLN LLQ+TTI+RF+KYH++EQEKTL +R+PACSVAAK+H+AS TSI+DVKGVG++NFS
Sbjct: 131 VDLNALLQLTTIERFVKYHVSEQEKTLKLRFPACSVAAKRHIASSTSIIDVKGVGVSNFS 190

Query: 182 KPARELFMEIQRIDSNNYPETLHRLFIVNAGSGFRVLWKALKAFLDPRTLAKIQVLGSNF 361
           +PAR LFMEIQ+IDSN YPETL+RLFIVNAGSGFR LWKA+KAFLD RT+AKI+VLGSN+
Sbjct: 191 RPARHLFMEIQKIDSNYYPETLNRLFIVNAGSGFRALWKAIKAFLDARTIAKIEVLGSNY 250

Query: 362 QNNLFEVIDPSTLPSFLGGYCACSEFGGCLLTDKGPWNDP 481
           Q+NL E IDPS LPSFL G C CS +GGCL +DKGPWNDP
Sbjct: 251 QSNLVEFIDPSNLPSFLCGNCTCSGYGGCLFSDKGPWNDP 290


>ref|XP_002528928.1| Sec14 cytosolic factor, putative [Ricinus communis]
           gi|223531630|gb|EEF33457.1| Sec14 cytosolic factor,
           putative [Ricinus communis]
          Length = 324

 Score =  265 bits (676), Expect = 4e-69
 Identities = 123/159 (77%), Positives = 144/159 (90%)
 Frame = +2

Query: 2   VDLNRLLQVTTIDRFLKYHIAEQEKTLNVRYPACSVAAKKHVASITSILDVKGVGMNNFS 181
           +DLN L QVTT++ F+KYH++EQEKTLN+R+PACS+AAK+H+A  TSILDVKGVGM+NFS
Sbjct: 131 IDLNSLFQVTTVENFVKYHVSEQEKTLNLRFPACSIAAKRHIAKTTSILDVKGVGMSNFS 190

Query: 182 KPARELFMEIQRIDSNNYPETLHRLFIVNAGSGFRVLWKALKAFLDPRTLAKIQVLGSNF 361
           KPAR LFMEIQ+IDSN YPETL++LFIVNAGSGFR+LWKALKAFLD RTLAKIQVLGSN+
Sbjct: 191 KPARCLFMEIQKIDSNYYPETLNQLFIVNAGSGFRMLWKALKAFLDARTLAKIQVLGSNY 250

Query: 362 QNNLFEVIDPSTLPSFLGGYCACSEFGGCLLTDKGPWND 478
           Q+NL EVID S LPSFLGG C CS++GGCL  DKGPWN+
Sbjct: 251 QSNLLEVIDASNLPSFLGGSCTCSDYGGCLFRDKGPWNN 289


>ref|XP_002304272.1| predicted protein [Populus trichocarpa] gi|222841704|gb|EEE79251.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  258 bits (659), Expect = 3e-67
 Identities = 120/160 (75%), Positives = 142/160 (88%)
 Frame = +2

Query: 2   VDLNRLLQVTTIDRFLKYHIAEQEKTLNVRYPACSVAAKKHVASITSILDVKGVGMNNFS 181
           VDLN LLQ TT+DRF++YH++EQEKTLN+R+PACS+AAK+H+ASITSILDVKGVGM+NFS
Sbjct: 131 VDLNALLQATTVDRFVRYHVSEQEKTLNIRFPACSIAAKRHIASITSILDVKGVGMSNFS 190

Query: 182 KPARELFMEIQRIDSNNYPETLHRLFIVNAGSGFRVLWKALKAFLDPRTLAKIQVLGSNF 361
           K AR LFMEIQ+IDSN YPE L+RLFIVNAG+GF++LWKAL AFLD RTLAKI VLG N+
Sbjct: 191 KTARSLFMEIQKIDSNYYPEILNRLFIVNAGNGFKMLWKALGAFLDARTLAKIHVLGYNY 250

Query: 362 QNNLFEVIDPSTLPSFLGGYCACSEFGGCLLTDKGPWNDP 481
            +NL EVID S LPSFLGG C CS++GGCL +DKGPW +P
Sbjct: 251 LSNLLEVIDQSNLPSFLGGDCTCSDYGGCLFSDKGPWQNP 290


>ref|XP_002326637.1| predicted protein [Populus trichocarpa] gi|222833959|gb|EEE72436.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  255 bits (652), Expect = 2e-66
 Identities = 118/160 (73%), Positives = 142/160 (88%)
 Frame = +2

Query: 2   VDLNRLLQVTTIDRFLKYHIAEQEKTLNVRYPACSVAAKKHVASITSILDVKGVGMNNFS 181
           VD+N L+Q TTI+RF+KYH++EQEKTLN+R+PACS+ AK+H+AS TSILDVKGVGM+NFS
Sbjct: 131 VDINSLVQATTIERFVKYHVSEQEKTLNLRFPACSITAKRHIASTTSILDVKGVGMSNFS 190

Query: 182 KPARELFMEIQRIDSNNYPETLHRLFIVNAGSGFRVLWKALKAFLDPRTLAKIQVLGSNF 361
           KPAR LFM+I +IDSN YPETL+RLFIVNAG+GFR+LWKAL+AFLD RTLAKI VLG N+
Sbjct: 191 KPARCLFMDILKIDSNYYPETLNRLFIVNAGNGFRMLWKALRAFLDARTLAKIHVLGCNY 250

Query: 362 QNNLFEVIDPSTLPSFLGGYCACSEFGGCLLTDKGPWNDP 481
            +NL EVID S LPSFLGG C CS++GGCL +DKGPW +P
Sbjct: 251 LSNLLEVIDQSNLPSFLGGNCTCSDYGGCLFSDKGPWQNP 290


Top